Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq352 93.3 8e-14 >seq352 Length=10598 Score = 93.3 bits (102), Expect = 8e-14 Identities = 152/210 (72%), Gaps = 7/210 (3%) Strand=Plus/Minus Query 101859 AGAAGGA-GCAGTGGGCTATTAATTGGA-TGCAAAGCAATAA-CGA-TTTGGCGGAACTA 101914 |||||| ||| |||||| || | |||| || || ||||| || ||| || |||| | Sbjct 7292 AGAAGGCTGCA-TGGGCTCTTCAATGGACTGACAAACAATACGCGTCTTTTGCTGAACGA 7234 Query 101915 ATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTC-GCATCCATTTT 101973 |||| || || ||||| || |||||||| ||||| |||| |||| ||| ||||| Sbjct 7233 CTTGTAGCGTTCGCTGCTGTAGAAGGAATTTTCTTCTCTGGTTCATTTTGCAGT-ATTTT 7175 Query 101974 CTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAG 102033 ||| | || || | ||| | |||| || ||||| | ||| ||||| || ||||| | Sbjct 7174 TTGGTTAAAAAAACGAGGTTTGATGCCAGGACTCACTTTCTCGAATGAATTAATTTCACG 7115 Query 102034 GGACGAAGGTCTTCATCGCGACTTTGCATG 102063 || |||||| | || ||||||||||||| Sbjct 7114 CGATGAAGGTTTACACTGCGACTTTGCATG 7085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989504933475380