Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq446 96.9 3e-15 >seq446 Length=43508 Score = 96.9 bits (106), Expect = 3e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 15166 GGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGTTTGCC 15225 |||||| || ||||| |||||||| || ||| | | | ||||| | ||||| || Sbjct 20804 GGTGGACTCCTTTTGGATGTTGTAGTCCGAGAGAGTGCGGCCATCTTCGAGCTGTTTACC 20745 Query 15226 AGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTGCTCTT 15285 |||| | || | ||| || ||||| ||||||||||| ||||| || || ||| Sbjct 20744 AGCGAAGATGAGACGCTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGGATCTTTTGCTT 20685 Query 15286 TACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTCAGAGT 15345 ||| | || || || ||| | ||| ||||| | || |||||||||||||| || || Sbjct 20684 CACATTCTCGATAGTGTCGGAAGGTTCGACATCGAGAGTGATGGTTTTACCTGTGAGGGT 20625 Query 15346 TTTTACAAAAATTTGCATATT 15366 || ||||| || ||||| || Sbjct 20624 CTTGACAAATATCTGCATTTT 20604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362151673928076