Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq446 136 3e-27 >seq446 Length=43508 Score = 136 bits (150), Expect = 3e-27 Identities = 149/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| |||||||| ||||| | || |||||| ||||||| |||| || || | || Sbjct 20606 AATGCAGATATTTGTCAAGACCCTCACAGGTAAAACCATCACTCTCGATGTCGAACCTTC 20665 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||||||||| |||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct 20666 CGACACTATCGAGAATGTGAAGCAAAAGATCCAGGACAAGGAAGGAATTCCTCCTGACCA 20725 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || || || || ||||| | ||||||| |||||| | || ||||| Sbjct 20726 GCAGCGTCTCATCTTCGCTGGTAAACAGCTCGAAGATGGCCGCACTCTCTCGGACTACAA 20785 Query 25178 TATTCAAAAAGAATCCAC 25195 || ||||| || ||||| Sbjct 20786 CATCCAAAAGGAGTCCAC 20803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433295066530340