Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq352 107 2e-18 seq458 93.3 5e-14 >seq352 Length=10598 Score = 107 bits (118), Expect = 2e-18 Identities = 150/205 (73%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| || ||| | ||| || || || || || | |||||||||||| |||||| Sbjct 7088 GCAAAGTCGCAGTGTAAACCTTCATCGCGTGAAATTAATTCATTCGAGAAAGTGAGTCCT 7147 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 ||||| | ||| || || || ||||| ||||| ||||||||||| |||||||| ||| Sbjct 7148 GGCATCAAACCTCGTTTTTTTAACCAAAAAATACTGCAAAATGAACCAGAGAAGAAAATT 7207 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCG-ACTTTGTGTCAAA 126225 || || ||| |||||||| | || || |||||||| || |||| | | | ||||| Sbjct 7208 CCTTCTACAGCAGCGAACGCTACAAGTCGTTCAGCAAAAGA-CGCGTATTGTTTGTCAGT 7266 Query 126226 CCACTTCATCGCCCACTGC-GCCTT 126249 ||| | | ||||| ||| ||||| Sbjct 7267 CCATTGAAGAGCCCA-TGCAGCCTT 7290 >seq458 Length=35501 Score = 93.3 bits (102), Expect = 5e-14 Identities = 547/869 (63%), Gaps = 9/869 (1%) Strand=Plus/Minus Query 114455 ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTG 114514 ||| |||| | ||| ||| ||||| |||||||| |||| | ||||| ||| Sbjct 31243 ACAAACTTGGAAAGATTGATAGACGCAAGATTACAGACAGCAATTTCATCTGGTGAAGTA 31184 Query 114515 TACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 114574 || || ||||| || ||||| | |||||| || || || || | || ||||| || Sbjct 31183 TATTCCATAATCTCAGTACAAAGATTTGACGATTTGATAGTTCCAAGATTTTTTTGGTTA 31124 Query 114575 GACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGAC 114634 || || | ||||| ||||| ||| || ||| || || || || || || | || ||| Sbjct 31123 GATTTGCTATTACAAGCATCTTTGAAACACATATAGGGAGTTCCGGTTTCGATCTGAGAC 31064 Query 114635 TTGAGAATAGCCTTCCAGACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCC 114694 | | || ||| | | ||| || || | ||| || | Sbjct 31063 TCCAATATTTGAAACCAAAGTTTTTGAGCTTTCATCGTTGTACGAGCTTTGCCTGAGTTT 31004 Query 114695 TCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCC-TCTGAGAGCCCTGGTGC 114753 ||||| || || || || ||| |||| ||||| | | | | || | ||| ||||| || Sbjct 31003 TCGTATTTAGTATAAAGAGCTACAAATTCTTC-CGAATGACAATCAGCGAGACCTGG-GC 30946 Query 114754 CTT-ATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGT 114812 || || ||||||||||||| ||| | | || | ||| || | |||||| | | Sbjct 30945 ATTCATTTGGGCAGAAGAGACTCCAATCTTGATTCTTTTGAACGCGTTCCATGAATAAAT 30886 Query 114813 CTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGA 114872 | || | ||| || | | |||||||| | || |||||||| | || ||||| Sbjct 30885 CAGGAACCCAAAGTCCATAAAAGAGATCTCTTGCACGCGCTTCTTCTTTACCATGATTCT 30826 Query 114873 GACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG 114932 || | | || || | ||||| ||||| ||||| || || || |||| | Sbjct 30825 TTTTCAGTTGAAGGAATTCAAGAATATCACAATGCCAAGGTTCGAGATAAACAGCGAAAG 30766 Query 114933 ACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAA 114989 | || || || | || | || | || || | || || ||||||| || | | Sbjct 30765 ATCCTTTTCGTTTTCCTCCCCCTTGATCAACGTAACGAGCAGTATCATTAAAAACTCTCA 30706 Query 114990 GCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTC 115049 |||||| | | ||||| || ||||| || || |||||| || ||| | | Sbjct 30705 ACATTGGTACAAGACCATTTGAAGAACCATTGGTTCCACGAATATAGGAGTTAGATCCAC 30646 Query 115050 TGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCG 115109 | || || || ||||||||||| || || |||| ||||| || || | Sbjct 30645 GAATATTGTGAATTGAAATACCAATACCACCAGCATACTTCGAGATGCATGCACAATTTT 30586 Query 115110 TGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCG 115169 | ||| || | || || || || || ||||| | || | | || || || ||| | Sbjct 30585 TAAGAGTGTCATAAATTCCTTCAATAGAGTCTTCTTTCATAGTCATGAGAAAACAGGATG 30526 Query 115170 ACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATAC 115229 ||||||| || | | | |||||||| || || ||||||||||| || || || | || Sbjct 30525 ACATTTGAGGGCGTCGAGTACCAGCATTAAATAGGGTTGGTGTTGCATGTGTGTA-ATGT 30467 Query 115230 CTTG-GGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCG 115288 | | |||||| | || || || ||||| || ||||| | ||| ||| ||||| Sbjct 30466 TTAGTTGACATCATTTCATACGTTTCCAAAACTTTTGGAATATTATCCTTGTGTATACCA 30407 Query 115289 ATCGAGACCCGCATAAACATGTATTGGGG 115317 | | ||| ||||| | ||||| ||| || Sbjct 30406 ACTGCGACACGCATGAGCATGTGTTGAGG 30378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597307036286880