Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq446 141 1e-28 >seq446 Length=43508 Score = 141 bits (156), Expect = 1e-28 Identities = 156/208 (75%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 42006 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 42065 ||||| ||| ||||||||| || ||||| || | ||||| || | || || ||||| Sbjct 20809 TGCAAGGTGGACTCCTTTTGGATGTTGTAGTCCGAGAGAGTGCGGCCATCTTCGAGCTGT 20750 Query 42066 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTT 42125 ||||||||||| ||||| ||||||||||| | || | | ||||||||| ||| ||| Sbjct 20749 TTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGGATCTTT 20690 Query 42126 TGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTT 42185 || || | || | | |||||| | ||| ||||||| ||||||||||| || || Sbjct 20689 TGCTTCACATTCTCGATAGTGTCGGAAGGTTCGACATCGAGAGTGATGGTTTTACCTGTG 20630 Query 42186 AGCGTCTTTACAAAGATTTGCATTTTCA 42213 || ||||| ||||| || |||||||||| Sbjct 20629 AGGGTCTTGACAAATATCTGCATTTTCA 20602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543170456562240