Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq446 104 2e-17 >seq446 Length=43508 Score = 104 bits (114), Expect = 2e-17 Identities = 146/203 (72%), Gaps = 4/203 (2%) Strand=Plus/Minus Query 14979 GGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGTTTGCC 15038 ||| || || ||||| |||||||| || |||| | | | ||||| | ||||| || Sbjct 20804 GGTGGACTCCTTTTGGATGTTGTAGTCCGAGAGAGTGCGGCCATCTTCGAGCTGTTTACC 20745 Query 15039 AGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAAT--TTTGCTT 15096 |||| | || | |||||| ||||| ||||||||||||||||| || ||||||| Sbjct 20744 AGCGAAGATGAGACGCTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGGATCTTTTGCTT 20685 Query 15097 TTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGA 15156 ||| | || ||||| ||| | ||| || || | || |||||||||||||| || Sbjct 20684 C--ACATTCTCGATAGTGTCGGAAGGTTCGACATCGAGAGTGATGGTTTTACCTGTGAGG 20627 Query 15157 GTTTTTACAAAAATTTGCATATT 15179 || || ||||| || ||||| || Sbjct 20626 GTCTTGACAAATATCTGCATTTT 20604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357364837761260