Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq446 89.7 5e-13 >seq446 Length=43508 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || || |||| || || ||||||||||| || || || || || ||| || Sbjct 20815 ACAAGGTGCAAGGTGGACTCCTTTTGGATGTTGTAGTCCGAGAGAGTGCGGCCATCTTCG 20756 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | ||||| || ||| | || | || |||||||| || ||||| ||||| || || || Sbjct 20755 AGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGG 20696 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 || ||||| || | || | |||||||||| ||||| |||||||| | ||||| Sbjct 20695 ATCTTTTGCTTCACATTCTCGATAGTGTCGGAAGGTTCGACATCGAGAGTGATGGTTTTA 20636 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || || ||||| || ||||| Sbjct 20635 CCTGTGAGGGTCTTGACAAATATCTGCAT 20607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451967966350560