Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stramenopiles_20sp._20TOSAG23-
6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq4040 163 3e-35
>seq4040
Length=2647
Score = 163 bits (180), Expect = 3e-35
Identities = 302/434 (70%), Gaps = 12/434 (3%)
Strand=Plus/Minus
Query 159377 ATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAG 159436
|| |||| | ||| ||||||| || ||| ||||| |||||||| ||||||||||| |
Sbjct 2628 ATCATAATCGGAATATATGTTTAATTCCAACATCAGCGCATGGAACCAATCCTGCATCTG 2569
Query 159437 CAGTGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGCAACATAGACA 159496
|||| ||||| |||||||| ||| | ||| || || ||| | | || |
Sbjct 2568 CAGTCCAAGCAGGTATGAAAGTAGTACCAATTAAGACTGTAGAAAGTGGTGATGTTGATA 2509
Query 159497 TCAAAGATCTAGAGAAGAAAGCAATCATGAATACATTTGAACTGTCATGTA----TTATG 159552
| ||||| | || |||||| || || || ||| | | || || | |||
Sbjct 2508 TGGAAGATTT-GA-AAGAAA--AAGCAGAAAAACACAAGGATAATCTTGCTGCACTGATG 2453
Query 159553 ATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATT 159612
| |||||||||||||| ||| ||||| ||| | || ||||| | | | |
Sbjct 2452 GTCACATATCCATCTACTTTTGGAGTATTCGAAGAAGGAATTGTTGAGATAATTGATACT 2393
Query 159613 GTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTA-GG 159671
|| ||| | |||||||||| |||||| | |||||||| ||| | || || || ||| ||
Sbjct 2392 GTACATACGCATGGTGGTCAAGTATATATGGATGGTGCTAATATGAACGCTCAAGTAGGG 2333
Query 159672 TCTAGCAAAACCATGTGACTA-TGGTGCAGATGTATGTCATCTAAACTTACATAAGACAT 159730
| || | || || | || ||| |||||||| |||||| |||| |||||||| || |
Sbjct 2332 TATA-CTTCTCC-TGGAAATATTGGAGCAGATGTGTGTCATTTAAATTTACATAAAACTT 2275
Query 159731 TCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAAACATC 159790
| |||||||| ||||| ||||| ||||| || || ||| |||||||||| || | ||||
Sbjct 2274 TTTGTATTCCGCATGGTGGTGGTGGTCCAGGTGTTGGTTCTATTGGTGTTGCGAGACATT 2215
Query 159791 TCACACCATTTGTA 159804
| |||| ||| ||
Sbjct 2214 TAGCACCGTTTTTA 2201
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588005361408960
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |