Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq446 158 3e-33 >seq446 Length=43508 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||||||||| | |||||||| ||||| || ||||| || | ||||| | |||||||| Sbjct 20816 AACAAGGTGCAAGGTGGACTCCTTTTGGATGTTGTAGTCCGAGAGAGTGCGGCCATCTTC 20757 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 |||||| ||||| |||||||| || || || ||||| |||||||| ||||| ||||| || Sbjct 20756 GAGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTG 20697 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || |||||||| || ||||| || ||||| ||| ||| || || || || | || || Sbjct 20696 GATCTTTTGCTTCACATTCTCGATAGTGTCGGAAGGTTCGACATCGAGAGTGATGGTTTT 20637 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 ||||| | || || || || | ||||||| Sbjct 20636 ACCTGTGAGGGTCTTGACAAATATCTGCATTT 20605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109392953807012