Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq3565 96.9 5e-15 >seq3565 Length=3152 Score = 96.9 bits (106), Expect = 5e-15 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 48049 ATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAGGTGTGGTC 48108 ||||| ||| || | ||||||||||| |||| |||||||||||||| || || || ||| Sbjct 251 ATCCAATACGCAAATTGTTTTGCAACAGCATATGGAGAACGTGGATAAAATGGCGTCGTC 310 Query 48109 TCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGATGCTTGATA 48164 ||| | ||||| | ||||| || |||||||| | ||| || ||||||||||| Sbjct 311 TCTTTTTGTGGTATTTCTTGAACTTTACCATATAATTCTGAAGTTGATGCTTGATA 366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665442524711520