Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq446 96.9 6e-15 >seq446 Length=43508 Score = 96.9 bits (106), Expect = 6e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 || || || || ||||| || | ||| || || || ||||| || | || | | Sbjct 20821 CGGAGAACAAGGTGCAAGGTGGACTCCTTTTGGATGTTGTAGTCCGAGAGAGTGCGGCCA 20762 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | ||||| || || || || | | ||| || |||||||| |||||||| || Sbjct 20761 TCTTCGAGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGAATTCCTTCCTTG 20702 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 || || || || || | ||| ||||| ||||||| || || || ||||| || Sbjct 20701 TCCTGGATCTTTTGCTTCACATTCTCGATAGTGTCGGAAGGTTCGACATCGAGAGTGATG 20642 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 ||||||||||| || || || |||||||| |||||||| Sbjct 20641 GTTTTACCTGTGAGGGTCTTGACAAATATCTGCATTTT 20604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899584271939520