Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq446 122 8e-23 >seq446 Length=43508 Score = 122 bits (134), Expect = 8e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | || || || || |||||||| || || ||||| || ||| | || Sbjct 20607 ATGCAGATATTTGTCAAGACCCTCACAGGTAAAACCATCACTCTCGATGTCGAACCTTCC 20666 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||||| ||||| |||||||| ||||| || || Sbjct 20667 GACACTATCGAGAATGTGAAGCAAAAGATCCAGGACAAGGAAGGAATTCCTCCTGACCAG 20726 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| || || |||||||| || ||| | | | || || || ||| Sbjct 20727 CAGCGTCTCATCTTCGCTGGTAAACAGCTCGAAGATGGCCGCACTCTCTCGGACTACAAC 20786 Query 24884 ATTCAAAAGGAATCGAC 24900 || |||||||| || || Sbjct 20787 ATCCAAAAGGAGTCCAC 20803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449862530482080