Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq446 91.5 1e-13 >seq446 Length=43508 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 110267 TTTAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAG 110326 || |||||||| ||||||||||| || | || || |||||||| || |||| || Sbjct 20601 TTGAAAATGCAGATATTTGTCAAGACCCTCACAGGTAAAACCATCACTCTCGATGTCGAA 20660 Query 110327 CCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTG 110386 ||| ||| ||| ||| | || || || ||||| ||||| ||||| | || Sbjct 20661 CCTTCCGACACTATCGAGAATGTGAAGCAAAAGATCCAGGACAAGGAAGGAATTCCTCCT 20720 Query 110387 GATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGAT 110446 || || || | || || | || ||||||||||| || |||| | | || | |||| Sbjct 20721 GACCAGCAGCGTCTCATCTTCGCTGGTAAACAGCTCGAAGATGGCCGCACTCTCTCGGAC 20780 Query 110447 TACAACATTCAAAAAGAATCTACGTTGCAC 110476 |||||||| ||||| || || || |||||| Sbjct 20781 TACAACATCCAAAAGGAGTCCACCTTGCAC 20810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412810223522348