Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq2062 86.0 1e-10 >seq2062 Length=5191 Score = 86.0 bits (94), Expect = 1e-10 Identities = 163/238 (68%), Gaps = 4/238 (2%) Strand=Plus/Plus Query 1485475 TTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATC 1485534 ||||| || || || ||||| || ||||| ||||| | || || || || | | | Sbjct 1217 TTGGTAACAGCTTTAGTACCTTCAGAGACAGCGTGTTTAGCGAGCTCTCCTGGGAGTACA 1276 Query 1485535 AGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCG--CTTGTTAGTGCGCG 1485592 ||||| | || ||||||| || |||| || ||||| |||||| || | Sbjct 1277 AGGCGGATAGCAGTCTGGACTTCTCGGGAA--GACAAGGTTGCTTTCTTGTTGTATCGTG 1334 Query 1485593 CCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGA 1485652 | |||||||| || || ||| | ||| |||| | ||| |||| || |||||||||| Sbjct 1335 CGAGGCGGCCAGCTTCCATGCATACGCGTTCGAAGACGTCATTGATGAAGGAGTTCATGA 1394 Query 1485653 TCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1485710 | ||||| | | |||||||| || || ||||| || || ||||| |||||||| Sbjct 1395 TGGACATTCCTCTCTTGGAGATACCGGTTTCAGGGTGAACTTGTTTGAGTACCTTGTA 1452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915583048237604