Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq446 114 8e-21 >seq446 Length=43508 Score = 114 bits (126), Expect = 8e-21 Identities = 155/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||| | |||| |||||| || ||||| |||||||| || |||| |||| Sbjct 20818 AGAACAAGGTGCAAGGTGGACTCCTTTTGGATGTTGTAGTCCGAGAGAGTGCGGCCATCT 20759 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || || || || |||||||| || || |||||||| | || | || |||||||| Sbjct 20758 TCGAGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGAATTCCTTCCTTGTCC 20699 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || ||||| || || || || || | || | |||||||| | || |||| Sbjct 20698 TGGATCTTTTGCTTCAC--ATTCTCGATAGTGTCGGAAGGTTCGACATCGAGAGTGATGG 20641 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || || ||||||||||| ||||| |||||||| Sbjct 20640 TTTTACCTGTGAGGGTCTTGACAAATATCTGCAT 20607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325668046940084