Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq1296 149 2e-30 >seq1296 Length=7318 Score = 149 bits (164), Expect = 2e-30 Identities = 285/417 (68%), Gaps = 6/417 (1%) Strand=Plus/Plus Query 188776 GTTGGCCCTACTGGTTCAGGTAAAACATTATTTGCTCAAACATTGGCTGATATGTTACAT 188835 ||||| ||||| || ||||| ||||||||||| || | || ||||| | | | || Sbjct 2989 GTTGGTCCTACAGGCTCAGGGAAAACATTATTGGCCAAGACTCTGGCTAGTCTTGTTGAT 3048 Query 188836 GTACCTCTAGCTATCTCTGATGCAACTTCTTTAACAGAAGCTGGTTATGTAGGTGAAGAT 188895 ||||| || ||||| |||||| || || |||| || | || || || ||||||||| Sbjct 3049 GTACCACTTGCTATAGTTGATGCCACATCACTAACTCAATCAGGATACGTTGGTGAAGAT 3108 Query 188896 GTGGAAAACGTATTGCTTCGTTTAATCCAAGCAGCTGATTACGATATCGAATTAGCGGAA 188955 || || | ||| |||||||| | ||| ||| |||||| | ||| | | || Sbjct 3109 GTAGAGTCAATTTTGTTTCGTTTATATAAGGCATCTGGCTACGATTTAGAAGCAACACAA 3168 Query 188956 CGTGGAATTGTATATATCGATGAAGTAGATAAAATTGCTAGAAAATCAGAAAGCACATCC 189015 | || | ||||| || |||||||| ||||| | ||| ||||| |||| || | Sbjct 3169 AGAGGTGTAGTATACATTGATGAAGTTGATAAGCTCGCTCGAAAAGCAGAGAGTGTAAAT 3228 Query 189016 ATTACCCGAGATGTATCTGGCGAAGGAGTACAGCAAGCTTTATTAAAAATCATTGAAGGT 189075 ||||| |||||||| ||||||||| ||||| ||||||||||| || || | ||||| Sbjct 3229 ATTACTCGAGATGTTAGTGGCGAAGGTGTACAACAAGCTTTATTGAAGATGCTCGAAGGA 3288 Query 189076 ACAGTTGCGAAAGTTCCTCCTCAAGGTGGTCGTAAACACCCTCACCAAGAAATGCTTGAA 189135 | || | | || ||| | || ||| | ||| ||| || | || | | || | Sbjct 3289 TCTGTGGTTCATGTACCTGAAAAGGGAGGTAGAAAAAACC--CAAGAGGAGA-GTTTATA 3345 Query 189136 ---ATAGATACAACTAATATCTTGTTTATTCTTGGTGGAGCGTTTGATGGTCTTGAA 189189 || ||||| || |||| | ||||| |||||| || |||| ||| |||||| Sbjct 3346 TCGATCGATACTACACATATACTATTTATATGTGGTGGTGCATTTGCTGGACTTGAA 3402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1591783208348928