Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq446 122 8e-23 >seq446 Length=43508 Score = 122 bits (134), Expect = 8e-23 Identities = 148/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| || || || ||||| || | ||| | | | || |||||||| || | Sbjct 20804 GGTGGACTCCTTTTGGATGTTGTAGTCCGAGAGAGTGCGGCCA-TCTTCGAGCTGTTTAC 20746 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | ||||| ||||||||||| ||||| || ||||||||||| ||||||||||| Sbjct 20745 CAGCGAAGATGAGACGCTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGGATCTTTTGCT 20686 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||| | ||||||| || || || |||| |||| |||||| || || || | Sbjct 20685 TCACATTCTCGATAGTGTCGGAAGGTTCGACATCGAGAGTGATGGTTTTACCTGTGAGGG 20626 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || |||||||| Sbjct 20625 TCTTGACAAATATCTGCAT 20607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483383117348640