Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq446 93.3 3e-14 >seq446 Length=43508 Score = 93.3 bits (102), Expect = 3e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 ||| ||||| |||||||| || ||||| ||||| | || || | ||||| || || || Sbjct 20798 CTCCTTTTGGATGTTGTAGTCCGAGAGAGTGCGGCCATCTTCGAGCTGTTTACCAGCGAA 20739 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677 || | ||||||||| || | || | ||||| ||||| || || || |||| ||| Sbjct 20738 GATGAGACGCTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGGATCTTTTGCTTCA-CAT 20680 Query 33678 AGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736 || | |||||| | ||| || || | ||||| ||||||||||| | || || | Sbjct 20679 TCTCGATAGTGTCGGAAGGTTCGACATCGAGAGTGATGGTTTTACCTGTGAGGGTCTTGA 20620 Query 33737 CAAAGATCTGCAT 33749 |||| |||||||| Sbjct 20619 CAAATATCTGCAT 20607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328679018085120