Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq446 129 1e-24 >seq446 Length=43508 Score = 129 bits (142), Expect = 1e-24 Identities = 165/227 (73%), Gaps = 3/227 (1%) Strand=Plus/Plus Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAA 206223 |||||| ||||||||| ||| || |||||||| ||||| |||||| | || || ||| Sbjct 20604 AAAATG---CAGATATTTGTCAAGACCCTCACAGGTAAAACCATCACTCTCGATGTCGAA 20660 Query 206224 AGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCG 206283 ||| ||||| |||| || ||||||||||| || || || ||||||||| || Sbjct 20661 CCTTCCGACACTATCGAGAATGTGAAGCAAAAGATCCAGGACAAGGAAGGAATTCCTCCT 20720 Query 206284 GACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGAT 206343 ||| || | || |||||||| || || ||| | |||||||| | ||| | | || Sbjct 20721 GACCAGCAGCGTCTCATCTTCGCTGGTAAACAGCTCGAAGATGGCCGCACTCTCTCGGAC 20780 Query 206344 TACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||| |||| || ||||| || | ||||||||| | | ||||| Sbjct 20781 TACAACATCCAAAAGGAGTCCACCTTGCACCTTGTTCTCCGCCTTCG 20827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181726373995356