Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq446 104 2e-17 >seq446 Length=43508 Score = 104 bits (114), Expect = 2e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||| | ||| | ||| | || | | | ||||| ||||| ||||||||||| | || Sbjct 20828 ACGAAGGCGGAGAACAAGGTGCAAGGTGGACTCCTTTTGGATGTTGTAGTCCGAGAGAGT 20769 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || |||||||||||||||||| | |||| |||||||| || || ||||| || || Sbjct 20768 GCGGCCATCTTCGAGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGAATTCC 20709 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 ||| || || || ||||| |||| | || | ||| |||| || || || |||| Sbjct 20708 TTCCTTGTCCTGGATCTTTTGCTTCACATTCTCGATAGTGTCGGAAGGTTCGACATCGAG 20649 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | |||||||| || || || || | || |||||||| Sbjct 20648 AGTGATGGTTTTACCTGTGAGGGTCTTGACAAATATCTGCAT 20607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476574048156960