Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq446 96.9 3e-15 >seq446 Length=43508 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27045 TGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGT 27104 || || || || || ||||| || |||||||| | |||| | |||||||||||| Sbjct 20809 TGCAAGGTGGACTCCTTTTGGATGTTGTAGTCCGAGAGAGTGCGGCCATCTTCGAGCTGT 20750 Query 27105 TTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTG 27164 ||||| ||| | ||||||||||| || || || || | || || || || |||||| Sbjct 20749 TTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGGATCTTT 20690 Query 27165 TTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTC 27224 | |||| | || | |||||| | | ||| || || ||||| || | ||| || || Sbjct 20689 TGCTTCACATTCTCGATAGTGTCGGAAGGTTCGACATCGAGAGTGATGGTTTTACCTGTG 20630 Query 27225 AGAGTTTTCACAAAGATTTGCAT 27247 || || || ||||| || ||||| Sbjct 20629 AGGGTCTTGACAAATATCTGCAT 20607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424902104454432