Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq458 145 1e-29 seq4407 118 1e-21 seq2023 118 1e-21 seq1166 118 1e-21 seq50 102 1e-16 >seq458 Length=35501 Score = 145 bits (160), Expect = 1e-29 Identities = 404/614 (66%), Gaps = 7/614 (1%) Strand=Plus/Minus Query 111559 AACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGC 111618 ||| || | |||||| | || |||| ||| || ||||||||||||| || || Sbjct 30905 AACGCGTTCCATGAATAAATCAGGAACCCAAAGTCCATAAAAGAGATCTCTTGCACGCGC 30846 Query 111619 CTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGG 111678 ||||| | ||| || || | | | |||||| || | ||||| ||||| || Sbjct 30845 TTCTTCTTTACCATGATTCTTTTTCAGTTGAAGGAATTCAAGAATATCACAATGCCAAGG 30786 Query 111679 CTCAAGATAGACTGCGATAGATCCCTTTCGA---CGCCCAGCTTGATTTACATAGCGCGC 111735 || ||||| || |||| |||||| ||||| | || |||||| || || || || Sbjct 30785 TTCGAGATAAACAGCGAAAGATCCTTTTCGTTTTCCTCCCCCTTGATCAACGTAACGAGC 30726 Query 111736 TGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCG 111795 || | ||||| || | | |||||| | || ||||| ||| |||||| || || || Sbjct 30725 AGTATCATTAAAAACTCTCAACATTGGTACAAGACCATTTGAAGAACCATTGGTTCCACG 30666 Query 111796 AATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTT 111855 |||| || ||| | | | || || || || |||||||| ||||| |||| Sbjct 30665 AATATAGGAGTTAGATCCACGAATATTGTGAATTGAAATACCAATACCACCAGCATACTT 30606 Query 111856 TGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTT 111915 ||||| ||||| | ||||||| |||| || || | || ||||| || || | Sbjct 30605 CGAGATGCATGCACAATTTTTAAGAGTGTCATAAATTCCTTCAATAGAGTCTTCTTTCAT 30546 Query 111916 GGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGG 111975 | || || || || ||||| || || | | | ||||||||||| || |||||||| Sbjct 30545 AGTCATGAGAAAACAGGATGACATTTGAGGGCGTCGAGTACCAGCATTAAATAGGGTTGG 30486 Query 111976 TGTTGCGTGAATGAACATACCTTG-GGACATCTTGTCGTATGTCTCCAAGACAGAATCAA 112034 |||||| || || | || | | |||||| | || || || ||||| || || Sbjct 30485 TGTTGCATGTGTGTA-ATGTTTAGTTGACATCATTTCATACGTTTCCAAAACTTTTGGAA 30427 Query 112035 TGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGGGGTTTCCATGA 112094 | | ||| ||| || || | |||||| ||||||| ||||| || || || | | Sbjct 30426 TATTATCCTTGTGTATACCAACTGCGACACGCATGAGCATGTGTTGAGGACGCTCAACAA 30367 Query 112095 GGATGCCATCGAGCCGTTGAAGATA-GCTCTTCTCAAGGGTTTTGAGACCAAAGTAACCA 112153 | || | | ||| | || || || | ||| | ||| |||| |||||||||||| Sbjct 30366 TTACTCCGTTTACACGTAGTAGGTATGCAC-GCTCTAAGGTCTTGAATCCAAAGTAACCA 30308 Query 112154 AAATCATAGTCCCG 112167 ||||||| || || Sbjct 30307 TAATCATAATCACG 30294 >seq4407 Length=2415 Score = 118 bits (130), Expect = 1e-21 Identities = 272/410 (66%), Gaps = 0/410 (0%) Strand=Plus/Plus Query 190210 CACGATAATGCCGAACAATTTGACGCAAGGACTGAATACTCTATGCGATATCTACAAATC 190269 |||||||| ||| |||||| | || |||||| | | | | ||| ||||| | Sbjct 1091 CACGATAACTGTGAAGTATTTGATGAAAAAACTGAAATGTTTTTCAGGTATGTACAAGTA 1150 Query 190270 TTGACTGCGTGTTGTGATTCTTTTGCACACGGTGCAAATGATGTCGCCAATTCAATCGGC 190329 || ||| ||||| ||| |||| | || ||||||||||| || || || || || || Sbjct 1151 TTTACTTGCTGTTGCGATAGTTTTTCTCATGGTGCAAATGACGTTGCTAACTCTATTGGT 1210 Query 190330 CCATTTGCCGCTATTTATGCCATCTACAAATCGGGTAAAGTCAGTAAGAATGCCGACATG 190389 || ||||| || ||||||| | || || | || | || |||||| || | Sbjct 1211 CCGTTTGCTGCAATTTATGTGGTTTATAATGCAGGAGAGGTTTCTAAGAAAAATGAACTT 1270 Query 190390 GGTAATGACGCGTATTGGATTCTCTCACTCGGTGCCACCGGTATCGTTGCGGGTCTCTCC 190449 || ||||||| ||||||||||| | |||||||| || || || || | | Sbjct 1271 GGAGATGACGCATATTGGATTCTTGCTCTCGGTGCTGTTGGGATTGTAATTGGGTTAGCT 1330 Query 190450 CTCTACGGTTACAAGATTCTAAACGCCCTTGGCACTAAAATGGCAAAACTTACGCCAAGT 190509 | || |||||||||||| | | | ||||| || |||||| ||| || || Sbjct 1331 ATTTATGGTTACAAGATTATGGAAGTTCTTGGTACACAAATGGTGAAATGCACTCCTTCA 1390 Query 190510 CGTGGTATTTGCATTGAACTTGGTGCGGCCGCTGTGATCATTTTGGGATCACGATTGGGT 190569 | || ||| |||||| | ||||| | ||||| |||||| |||| || || | || Sbjct 1391 AGAGGATTTTCTATTGAATTAGGTGCCGTTGCTGTAATCATTATGGGTACAAGACTCGGA 1450 Query 190570 TGGCCTCTCTCTACGACGCATTGCCAAGTTGGTGCAACCGTTGGTGTTGC 190619 || || || || || ||||||||||| ||||| || |||||| || Sbjct 1451 ATTCCACTTTCGACAACACATTGCCAAGTAGGTGCTACGTGTGGTGTAGC 1500 Score = 98.7 bits (108), Expect = 1e-15 Identities = 249/372 (67%), Gaps = 12/372 (3%) Strand=Plus/Plus Query 189417 TGAATGGATCGTCGTCACGGGGGCTATATTCGCCTTTCTCGCCT-CTTTTGGAATAGGTG 189475 || |||| |||| || | ||| || | | || |||||| || | || || || |||| Sbjct 175 TGTATGGCTCGTTGTTATGGGTGCGCT-TGCGAGTTTCTCTGCTGCATTCGGCATTGGTG 233 Query 189476 CAAATGATGTTGCCAACGCTTTCGCAACATCAGTTGGATC-AGGGGCTTTGAAAGTTAAA 189534 | ||||| ||||| ||| | | || || | ||||| || | | | || | ||| Sbjct 234 CTAATGACGTTGCAAACTCACTTGCTACGGCTGTTGGTTCCANAGCCATTACCA---AAA 290 Query 189535 C--AAGCCGTACCACTTGCGGCTGTGTGTGAATTCTCGGGGTCTCTGTTTATGGGAAGTC 189592 | ||||||| |||||||| | | ||||||| || | | || | || | | Sbjct 291 CGCAAGCCGTCTTTCTTGCGGCATTCTTCGAATTCTTTGGAAGTATTTTACTCGGGAACC 350 Query 189593 ATGTCGTAAAAACAATACGAAAAGGAATCAGCGATCAAGAATGTTTTGTTGACGACCCCG 189652 |||| ||| || || || ||||| || || |||||||| |||| ||| | || | Sbjct 351 ATGTAACAAAGACTATTCGCAAAGGTATTGCNGACCAAGAATGCTTTGAAGACAATCCTG 410 Query 189653 GACTTCTCATGTATGGATGTTTATGTGTTATACTGTCAGTCGCTATATGG--TTAATTGT 189710 || |||||||||||| | |||||| | | | || || || ||| ||| ||| Sbjct 411 CTCTGCTCATGTATGGAATGATGTGTGTTCTTTTCGCTGTTGCAATCTGGCTTTACTTG- 469 Query 189711 TGCGTCTTATTTTGAAATGCCTGTATCTACAACACATTCATGTGTCGGTGGCATGATTGG 189770 ||| || | | |||||||||| |||||| ||||| ||||||||||| || |||| Sbjct 470 -GCGACTAAATGGAGAATGCCTGTAAGTACAACTCATTCTTGTGTCGGTGGTATTGTTGG 528 Query 189771 AATGACGATGGT 189782 ||||| ||||| Sbjct 529 TATGACTATGGT 540 >seq2023 Length=5341 Score = 118 bits (130), Expect = 1e-21 Identities = 272/410 (66%), Gaps = 0/410 (0%) Strand=Plus/Plus Query 190210 CACGATAATGCCGAACAATTTGACGCAAGGACTGAATACTCTATGCGATATCTACAAATC 190269 |||||||| ||| |||||| | || |||||| | | | | ||| ||||| | Sbjct 1091 CACGATAACTGTGAAGTATTTGATGAAAAAACTGAAATGTTTTTCAGGTATGTACAAGTA 1150 Query 190270 TTGACTGCGTGTTGTGATTCTTTTGCACACGGTGCAAATGATGTCGCCAATTCAATCGGC 190329 || ||| ||||| ||| |||| | || ||||||||||| || || || || || || Sbjct 1151 TTTACTTGCTGTTGCGATAGTTTTTCTCATGGTGCAAATGACGTTGCTAACTCTATTGGT 1210 Query 190330 CCATTTGCCGCTATTTATGCCATCTACAAATCGGGTAAAGTCAGTAAGAATGCCGACATG 190389 || ||||| || ||||||| | || || | || | || |||||| || | Sbjct 1211 CCGTTTGCTGCAATTTATGTGGTTTATAATGCAGGAGAGGTTTCTAAGAAAAATGAACTT 1270 Query 190390 GGTAATGACGCGTATTGGATTCTCTCACTCGGTGCCACCGGTATCGTTGCGGGTCTCTCC 190449 || ||||||| ||||||||||| | |||||||| || || || || | | Sbjct 1271 GGAGATGACGCATATTGGATTCTTGCTCTCGGTGCTGTTGGGATTGTAATTGGGTTAGCT 1330 Query 190450 CTCTACGGTTACAAGATTCTAAACGCCCTTGGCACTAAAATGGCAAAACTTACGCCAAGT 190509 | || |||||||||||| | | | ||||| || |||||| ||| || || Sbjct 1331 ATTTATGGTTACAAGATTATGGAAGTTCTTGGTACACAAATGGTGAAATGCACTCCTTCA 1390 Query 190510 CGTGGTATTTGCATTGAACTTGGTGCGGCCGCTGTGATCATTTTGGGATCACGATTGGGT 190569 | || ||| |||||| | ||||| | ||||| |||||| |||| || || | || Sbjct 1391 AGAGGATTTTCTATTGAATTAGGTGCCGTTGCTGTAATCATTATGGGTACAAGACTCGGA 1450 Query 190570 TGGCCTCTCTCTACGACGCATTGCCAAGTTGGTGCAACCGTTGGTGTTGC 190619 || || || || || ||||||||||| ||||| || |||||| || Sbjct 1451 ATTCCACTTTCGACAACACATTGCCAAGTAGGTGCTACGTGTGGTGTAGC 1500 Score = 98.7 bits (108), Expect = 1e-15 Identities = 249/372 (67%), Gaps = 12/372 (3%) Strand=Plus/Plus Query 189417 TGAATGGATCGTCGTCACGGGGGCTATATTCGCCTTTCTCGCCT-CTTTTGGAATAGGTG 189475 || |||| |||| || | ||| || | | || |||||| || | || || || |||| Sbjct 175 TGTATGGCTCGTTGTTATGGGTGCGCT-TGCGAGTTTCTCTGCTGCATTCGGCATTGGTG 233 Query 189476 CAAATGATGTTGCCAACGCTTTCGCAACATCAGTTGGATC-AGGGGCTTTGAAAGTTAAA 189534 | ||||| ||||| ||| | | || || | ||||| || | | | || | ||| Sbjct 234 CTAATGACGTTGCAAACTCACTTGCTACGGCTGTTGGTTCCANAGCCATTACCA---AAA 290 Query 189535 C--AAGCCGTACCACTTGCGGCTGTGTGTGAATTCTCGGGGTCTCTGTTTATGGGAAGTC 189592 | ||||||| |||||||| | | ||||||| || | | || | || | | Sbjct 291 CGCAAGCCGTCTTTCTTGCGGCATTCTTCGAATTCTTTGGAAGTATTTTACTCGGGAACC 350 Query 189593 ATGTCGTAAAAACAATACGAAAAGGAATCAGCGATCAAGAATGTTTTGTTGACGACCCCG 189652 |||| ||| || || || ||||| || || |||||||| |||| ||| | || | Sbjct 351 ATGTAACAAAGACTATTCGCAAAGGTATTGCNGACCAAGAATGCTTTGAAGACAATCCTG 410 Query 189653 GACTTCTCATGTATGGATGTTTATGTGTTATACTGTCAGTCGCTATATGG--TTAATTGT 189710 || |||||||||||| | |||||| | | | || || || ||| ||| ||| Sbjct 411 CTCTGCTCATGTATGGAATGATGTGTGTTCTTTTCGCTGTTGCAATCTGGCTTTACTTG- 469 Query 189711 TGCGTCTTATTTTGAAATGCCTGTATCTACAACACATTCATGTGTCGGTGGCATGATTGG 189770 ||| || | | |||||||||| |||||| ||||| ||||||||||| || |||| Sbjct 470 -GCGACTAAATGGAGAATGCCTGTAAGTACAACTCATTCTTGTGTCGGTGGTATTGTTGG 528 Query 189771 AATGACGATGGT 189782 ||||| ||||| Sbjct 529 TATGACTATGGT 540 >seq1166 Length=8465 Score = 118 bits (130), Expect = 1e-21 Identities = 272/410 (66%), Gaps = 0/410 (0%) Strand=Plus/Plus Query 190210 CACGATAATGCCGAACAATTTGACGCAAGGACTGAATACTCTATGCGATATCTACAAATC 190269 |||||||| ||| |||||| | || |||||| | | | | ||| ||||| | Sbjct 1091 CACGATAACTGTGAAGTATTTGATGAAAAAACTGAAATGTTTTTCAGGTATGTACAAGTA 1150 Query 190270 TTGACTGCGTGTTGTGATTCTTTTGCACACGGTGCAAATGATGTCGCCAATTCAATCGGC 190329 || ||| ||||| ||| |||| | || ||||||||||| || || || || || || Sbjct 1151 TTTACTTGCTGTTGCGATAGTTTTTCTCATGGTGCAAATGACGTTGCTAACTCTATTGGT 1210 Query 190330 CCATTTGCCGCTATTTATGCCATCTACAAATCGGGTAAAGTCAGTAAGAATGCCGACATG 190389 || ||||| || ||||||| | || || | || | || |||||| || | Sbjct 1211 CCGTTTGCTGCAATTTATGTGGTTTATAATGCAGGAGAGGTTTCTAAGAAAAATGAACTT 1270 Query 190390 GGTAATGACGCGTATTGGATTCTCTCACTCGGTGCCACCGGTATCGTTGCGGGTCTCTCC 190449 || ||||||| ||||||||||| | |||||||| || || || || | | Sbjct 1271 GGAGATGACGCATATTGGATTCTTGCTCTCGGTGCTGTTGGGATTGTAATTGGGTTAGCT 1330 Query 190450 CTCTACGGTTACAAGATTCTAAACGCCCTTGGCACTAAAATGGCAAAACTTACGCCAAGT 190509 | || |||||||||||| | | | ||||| || |||||| ||| || || Sbjct 1331 ATTTATGGTTACAAGATTATGGAAGTTCTTGGTACACAAATGGTGAAATGCACTCCTTCA 1390 Query 190510 CGTGGTATTTGCATTGAACTTGGTGCGGCCGCTGTGATCATTTTGGGATCACGATTGGGT 190569 | || ||| |||||| | ||||| | ||||| |||||| |||| || || | || Sbjct 1391 AGAGGATTTTCTATTGAATTAGGTGCCGTTGCTGTAATCATTATGGGTACAAGACTCGGA 1450 Query 190570 TGGCCTCTCTCTACGACGCATTGCCAAGTTGGTGCAACCGTTGGTGTTGC 190619 || || || || || ||||||||||| ||||| || |||||| || Sbjct 1451 ATTCCACTTTCGACAACACATTGCCAAGTAGGTGCTACGTGTGGTGTAGC 1500 Score = 98.7 bits (108), Expect = 1e-15 Identities = 249/372 (67%), Gaps = 12/372 (3%) Strand=Plus/Plus Query 189417 TGAATGGATCGTCGTCACGGGGGCTATATTCGCCTTTCTCGCCT-CTTTTGGAATAGGTG 189475 || |||| |||| || | ||| || | | || |||||| || | || || || |||| Sbjct 175 TGTATGGCTCGTTGTTATGGGTGCGCT-TGCGAGTTTCTCTGCTGCATTCGGCATTGGTG 233 Query 189476 CAAATGATGTTGCCAACGCTTTCGCAACATCAGTTGGATC-AGGGGCTTTGAAAGTTAAA 189534 | ||||| ||||| ||| | | || || | ||||| || | | | || | ||| Sbjct 234 CTAATGACGTTGCAAACTCACTTGCTACGGCTGTTGGTTCCANAGCCATTACCA---AAA 290 Query 189535 C--AAGCCGTACCACTTGCGGCTGTGTGTGAATTCTCGGGGTCTCTGTTTATGGGAAGTC 189592 | ||||||| |||||||| | | ||||||| || | | || | || | | Sbjct 291 CGCAAGCCGTCTTTCTTGCGGCATTCTTCGAATTCTTTGGAAGTATTTTACTCGGGAACC 350 Query 189593 ATGTCGTAAAAACAATACGAAAAGGAATCAGCGATCAAGAATGTTTTGTTGACGACCCCG 189652 |||| ||| || || || ||||| || || |||||||| |||| ||| | || | Sbjct 351 ATGTAACAAAGACTATTCGCAAAGGTATTGCNGACCAAGAATGCTTTGAAGACAATCCTG 410 Query 189653 GACTTCTCATGTATGGATGTTTATGTGTTATACTGTCAGTCGCTATATGG--TTAATTGT 189710 || |||||||||||| | |||||| | | | || || || ||| ||| ||| Sbjct 411 CTCTGCTCATGTATGGAATGATGTGTGTTCTTTTCGCTGTTGCAATCTGGCTTTACTTG- 469 Query 189711 TGCGTCTTATTTTGAAATGCCTGTATCTACAACACATTCATGTGTCGGTGGCATGATTGG 189770 ||| || | | |||||||||| |||||| ||||| ||||||||||| || |||| Sbjct 470 -GCGACTAAATGGAGAATGCCTGTAAGTACAACTCATTCTTGTGTCGGTGGTATTGTTGG 528 Query 189771 AATGACGATGGT 189782 ||||| ||||| Sbjct 529 TATGACTATGGT 540 >seq50 Length=24914 Score = 102 bits (112), Expect = 1e-16 Identities = 310/471 (66%), Gaps = 21/471 (4%) Strand=Plus/Minus Query 11436 CCACTTGGATCTTGCGATCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCA 11495 ||||||| |||| |||||||| | || ||||| | | ||| | |||||||||||| | Sbjct 7499 CCACTTGAATCTGTCGATCAAATCTCCCTGGGCGCAAAATGGCTTTATCAAGGATATCGA 7440 Query 11496 CGCGATTAGTGGCCGCAATAACCACAATGCCAGTCTCAT---TGTCAAAGCCATCCATCT 11552 | ||||| || | || | ||| || | || ||| | | |||||||||||||| | Sbjct 7439 CCCGATTTGTACCTGCTAGAACAACTA---CACCCTCTTGGGTTTCAAAGCCATCCATTT 7383 Query 11553 CGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGCATACCACCAGCAC 11612 | | ||||||||| | ||| | |||||| ||||| || | || | | | | | Sbjct 7382 CAACTAATAATTGATTCAGTGTGTTTTCTCTTTCATC-GTTACCACCAGAAAATCCACCC 7324 Query 11613 TGCGTTGCTTG----CCCACCGCATCAATCTCATCAATGAAGACAATACATGGTTGATTT 11668 | || | ||| | || ||||||||||||||||| || | ||||| || | | Sbjct 7323 TTCGATCGTTGTCGAGCAACTGCATCAATCTCATCAATAAAAATGATACAAGGAGCTTGT 7264 Query 11669 TCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCC 11728 || | || ||| ||| | ||||||||| || | || |||||||| ||||| || Sbjct 7263 TCTCTTGCTTTTTTAAACAAATCGCGAACTCTAGACGGTCCAACACCAACGAACATTTCA 7204 Query 11729 ACAAAGTTTGCGGCAGAGCACTGG--ATGAATGGGACATTTGATTCACCCGCGATGGCTC 11786 | ||| | || | || || ||| | ||||| ||| || ||| || || |||| Sbjct 7203 ATAAAATCTGAACCTGA-CA-TGGAAAAAAATGGTACAGATGCTTCTCCAGCCGTGGCCT 7146 Query 11787 GGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCT 11846 || || || || || || || ||||| ||| | || | || ||| || | | Sbjct 7145 TTGCCAGCAGAGTTTTACCAGTCCCTGGGGGACCAACCAGTAATGCTCCTTTTGGAACTT 7086 Query 11847 TGGCACC---ACTTCCAAAATATCTCTCGGGTTGCTTGAGAAAATCCACAA 11894 | ||||| || | ||| || | ||||||| || ||||| | ||||| Sbjct 7085 TTGCACCTAGACGTACAA---ATTTTTCGGGTTTTTTAAGAAATTGCACAA 7038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627983044905600