Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq446 212 1e-49 >seq446 Length=43508 Score = 212 bits (234), Expect = 1e-49 Identities = 182/225 (81%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || |||||||| | |||||||| ||||||||||| || |||| || || Sbjct 20828 ACGAAGGCGGAGAACAAGGTGCAAGGTGGACTCCTTTTGGATGTTGTAGTCCGAGAGAGT 20769 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||| ||||| || || |||||||| || || || ||||||||||||| ||| Sbjct 20768 GCGGCCATCTTCGAGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGAATTCC 20709 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||||||||||||| ||||| || ||||| ||||| || ||| || ||||| Sbjct 20708 TTCCTTGTCCTGGATCTTTTGCTTCACATTCTCGATAGTGTCGGAAGGTTCGACATCGAG 20649 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 |||||| || || || ||||| ||||| ||||| | ||||||||| Sbjct 20648 AGTGATGGTTTTACCTGTGAGGGTCTTGACAAATATCTGCATTTT 20604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159059385204140