Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq446 154 4e-32 seq137 105 2e-17 >seq446 Length=43508 Score = 154 bits (170), Expect = 4e-32 Identities = 169/225 (75%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || |||||||| | ||||| || ||||||| ||||| || | | ||| Sbjct 20828 ACGAAGGCGGAGAACAAGGTGCAAGGTGGACTCCTTTTGGATGTTGTAGTCCGAGAGAGT 20769 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| ||||| || ||||||||||| || || || ||||| || ||||| || Sbjct 20768 GCGGCCATCTTCGAGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGAATTCC 20709 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||| |||||||||||||||||| ||||| ||||| || | ||| || || | Sbjct 20708 TTCCTTGTCCTGGATCTTTTGCTTCACATTCTCGATAGTGTCGGAAGGTTCGACATCGAG 20649 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| || || || || | || || | || | |||||||| Sbjct 20648 AGTGATGGTTTTACCTGTGAGGGTCTTGACAAATATCTGCATTTT 20604 >seq137 Length=16762 Score = 105 bits (116), Expect = 2e-17 Identities = 102/130 (78%), Gaps = 1/130 (1%) Strand=Plus/Minus Query 7734 GTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATC 7793 ||||||||| || |||| |||| |||||||||| || |||||||||| | ||| | Sbjct 4027 GTTGGTAAGGTTTCCCGCGTATTATCGAATTAAACCAAATGCTCCACCGCTGTTCCAAAC 3968 Query 7794 TTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATATTT-AC 7852 | |||||| || ||||||||||||| |||||| |||| | | |||| ||||| ||| || Sbjct 3967 TCCCGTCAATTCCTTTGAGTTTTAATCTTGCGACCGTACTCCCCAGGCGGAATGTTTAAC 3908 Query 7853 GCGTTAGCTT 7862 | |||| ||| Sbjct 3907 GTGTTAACTT 3898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192435918247784