Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq352 241 1e-58 >seq352 Length=10598 Score = 241 bits (266), Expect = 1e-58 Identities = 592/885 (67%), Gaps = 26/885 (3%) Strand=Plus/Plus Query 23223 ATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTTCCAT 23282 ||| || ||||||||| |||| ||||| ||||| || || | ||| || ||| | ||| Sbjct 6799 ATACTCACCAACACGTTTTTCAAAAAAGTTTGTTTTTCCTTGTAAAGAAATAAGATTCAT 6858 Query 23283 AAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGATAATTCCTTTAAAAGCCT 23342 | ||||||||||| |||||||| || | ||| | | | | ||| | Sbjct 6859 CCATTCAAATGGATTTTTCGTATTATAAACTTTATCACACCCAAGCTGGTAGATAAGACG 6918 Query 23343 ATCTGCTACA-AATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTA 23401 ||| || ||| |||||||| ||||| ||||| || | | || || || || |||| || Sbjct 6919 ATCAGC-ACAGAATTCAATGTATTGGCACATTAATGTAGAATTCATTCCAATAAGTTCTA 6977 Query 23402 CTGGAATCGCATCATATAAGAATAGTTTTTCAATGGA--AACAGCATCTTTAATTATTTG 23459 |||| | |||||| | ||| ||||| | || |||||| | ||| || | Sbjct 6978 CTGGTAAAGCATCACTGACAAATCTCTTTTC--TTGATCAACAGCTGATACAATGATCTC 7035 Query 23460 ---AACAATAACTTCTTCACTAGGTGGATATTTTAAA--TACTTAAACAATAAACATGCA 23514 |||| | || | | || | ||||| || | ||| ||| | ||||||| Sbjct 7036 GGTAACACGAGATTTTGGA--AGTT---TATTTACAAGCTGGTTATACACGAGACATGCA 7090 Query 23515 AAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGC 23574 || || || |||| |||||||| | ||| |||||||| || || || | ||||||| Sbjct 7091 AAGTCGCAGTGTAAACCTTCATCGCGTGAAATTAATTCATTCGAGAAAGTGAGTCCTGGC 7150 Query 23575 ATTAATCCTCGTTTTTTAATCCAAAATAT--TGCAGCAAATGATCCGGAAAAGAAAATAC 23632 || || ||||||||||| | |||||| || |||| |||||| || || |||||||| | Sbjct 7151 ATCAAACCTCGTTTTTTTAACCAAAAAATACTGCA--AAATGAACCAGAGAAGAAAATTC 7208 Query 23633 CCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGC--ATTATAA-TCAGAAA 23689 | || ||||| || || || ||||| ||| | |||| | || ||| | |||| Sbjct 7209 CTTCTACAGCAGCGAACGCTACAAGTCGTTCAGCAAAAGACGCGTATTGTTTGTCAG--- 7265 Query 23690 TCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTA 23749 |||||| | ||| ||||||| ||| || || | ||||| ||||| |||| Sbjct 7266 TCCATTGAAGAGCCCATGCAGCCTTCTCTTTAACGCAAGGGACAGTTTCGATTGCGTTTA 7325 Query 23750 AGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTT 23809 | | | |||| || | || || || || | || ||||| || | | ||||| || Sbjct 7326 ACAAGTGATTTTTCTCGGCTTTCTCAGTAATTAACGTGTCAATAAGAAGAGAATACACTT 7385 Query 23810 CAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATT 23869 | |||||||| |||||||||||||| ||||| |||||||| |||| ||||||| ||| Sbjct 7386 CCGAATGAATGTTTTCAATAGCAATTTGAAAACCATAAAAGCATCGCGCTTCAGCACATT 7445 Query 23870 GAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAA 23929 | | || | | || | | || || |||||||| ||||| |||||||| ||||||| Sbjct 7446 GCATGTCTTCCATGAAATTGGTTGCCAAGTTTTCGTTTACAATTCCATCACTTGCAGCAA 7505 Query 23930 AGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATCAT 23989 |||| || |||| | || || || | ||| || | ||| | ||||| | || Sbjct 7506 AGAACGCGAGAATGTGAGAAATGAAGTGACGTTCGTCCGATGAGAGTTTTTCGTAGTCCC 7565 Query 23990 TAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTAT 24049 | | || | | | || | || ||| | |||||||| ||| || ||||| Sbjct 7566 TTGTGTCACTCGCAAGGTCGAGCTCTTCAGCCGTCCAAAAGGAGGCCTCAGCTTTCTTAT 7625 Query 24050 ACATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAATC 24094 ||||| |||||| ||| ||| |||||||| | || |||| Sbjct 7626 ACATTTCCCAAATGTCAGAATGAACGATTGGAAAGAGAACAAATC 7670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521447350010400