Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq446 181 3e-40 >seq446 Length=43508 Score = 181 bits (200), Expect = 3e-40 Identities = 170/216 (79%), Gaps = 3/216 (1%) Strand=Plus/Plus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | || || || || || |||||||| ||||| ||||| ||||| || ||| Sbjct 20604 AAAATGC---AGATATTTGTCAAGACCCTCACAGGTAAAACCATCACTCTCGATGTCGAA 20660 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 || ||||| |||||||| || || |||||||| |||||||| |||||||| ||||| Sbjct 20661 CCTTCCGACACTATCGAGAATGTGAAGCAAAAGATCCAGGACAAGGAAGGAATTCCTCCT 20720 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 |||||||| || || |||||||| || ||||||||||||||||| | ||||| | || Sbjct 20721 GACCAGCAGCGTCTCATCTTCGCTGGTAAACAGCTCGAAGATGGCCGCACTCTCTCGGAC 20780 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTT 178130 || ||| ||||||| || || || |||| |||||| Sbjct 20781 TACAACATCCAAAAGGAGTCCACCTTGCACCTTGTT 20816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203635023381784