Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG41- 1_20[genbank_20GCA_5F900128575.1_202016-12-02] 9,021 sequences; 30,044,774 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq6724 96.9 4e-15 seq205 96.9 4e-15 >seq6724 Length=3408 Score = 96.9 bits (106), Expect = 4e-15 Identities = 211/313 (67%), Gaps = 10/313 (3%) Strand=Plus/Plus Query 145777 GTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGC 145836 |||||||| | | |||||||||||| || |||| || | | ||| ||| || Sbjct 211 GTCAGCAGTGCGGTGCTGGCTATGTTAAATGGCAGACCTAAAAAGACATCCGACGAACGT 270 Query 145837 TGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAG 145896 ||||||| || || ||| ||| | ||||| |||||||| ||| || ||||| Sbjct 271 TGGTACATTTGACAATGCAGCCGCCCTTCTGCCACATAGAACTGATACATGACATGGCAT 330 Query 145897 GGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTG 145956 || |||||| ||| | | | | || |||||||| || | ||||| | | ||| Sbjct 331 GGTGGCAGGCACATCTGGTGTTGCGCAGCAGGGTTCCACGCACTCAGGACCATACGTCTG 390 Query 145957 CTCTCGGGGTTCCTCTTG-ATCTCCCCTATCAGGTCCCTGAGC----TGGTCCACGCCCT 146011 || ||||| |||||| || ||| ||||| |||||| || || ||||| | Sbjct 391 CTGGTAGGGTT-CTCTTGAATATCCTTTATCA----ACTGAGCGATTTGATCGACGCCTT 445 Query 146012 GCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACC 146071 ||| || ||||||||| | ||||| || |||| || || || | ||| || |||| Sbjct 446 TTCCCGTATAGTCTGTCTTGCAATCCACATAGTCGGCACCAAAATGTCGCCATTGAAACC 505 Query 146072 CGTAGACGGGCCC 146084 |||| ||||| || Sbjct 506 CGTATACGGGTCC 518 >seq205 Length=1850 Score = 96.9 bits (106), Expect = 4e-15 Identities = 211/313 (67%), Gaps = 10/313 (3%) Strand=Plus/Plus Query 145777 GTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGC 145836 |||||||| | | |||||||||||| || |||| || | | ||| ||| || Sbjct 759 GTCAGCAGTGCGGTGCTGGCTATGTTAAATGGCAGACCTAAAAAGACATCCGACGAACGT 818 Query 145837 TGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAG 145896 ||||||| || || ||| ||| | ||||| |||||||| ||| || ||||| Sbjct 819 TGGTACATTTGACAATGCAGCCGCCCTTCTGCCACATAGAACTGATACATGACATGGCAT 878 Query 145897 GGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTG 145956 || |||||| ||| | | | | || |||||||| || | ||||| | | ||| Sbjct 879 GGTGGCAGGCACATCTGGTGTTGCGCAGCAGGGTTCCACGCACTCAGGACCATACGTCTG 938 Query 145957 CTCTCGGGGTTCCTCTTG-ATCTCCCCTATCAGGTCCCTGAGC----TGGTCCACGCCCT 146011 || ||||| |||||| || ||| ||||| |||||| || || ||||| | Sbjct 939 CTGGTAGGGTT-CTCTTGAATATCCTTTATCA----ACTGAGCGATTTGATCGACGCCTT 993 Query 146012 GCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACC 146071 ||| || ||||||||| | ||||| || |||| || || || | ||| || |||| Sbjct 994 TTCCCGTATAGTCTGTCTTGCAATCCACATAGTCGGCACCAAAATGTCGCCATTGAAACC 1053 Query 146072 CGTAGACGGGCCC 146084 |||| ||||| || Sbjct 1054 CGTATACGGGTCC 1066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590010261464840