Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG41- 1_20[genbank_20GCA_5F900128575.1_202016-12-02] 9,021 sequences; 30,044,774 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq7946 89.7 4e-13 >seq7946 Length=2495 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || ||||| || | || || | ||||| || | ||||||||| || || ||||| | | Sbjct 428 CCTCCTCGTAGGCGAAGGACTAAGTGCAAGGTTGCCTCCTTTTGGATATTGTAGTCGGAC 369 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || | |||| |||| || || || ||| | || | || ||||| || || Sbjct 368 AATGTGCGCCCGTCTTCCAATTGCTTTCCAGCAAAGATCAATCGTTGCTGATCTGGAGGA 309 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| ||||||||| ||||| | ||| ||||| | || || Sbjct 308 ATGCCTTCCTTGTCTTGGATCTTTTGCTTCACGTTTTCGATGGTATCGCTTGGTTCTACG 249 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| ||||| || ||||| || || || || || |||||||| Sbjct 248 TCAAGGGTGATGGTTTTACCGGTCAAAGTCTTTACGAAGATTTGCAT 202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422212775372036