Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stramenopiles_20sp._20TOSAG41-
1_20[genbank_20GCA_5F900128575.1_202016-12-02] 9,021 sequences; 30,044,774 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq7946 118 1e-21
>seq7946
Length=2495
Score = 118 bits (130), Expect = 1e-21
Identities = 166/233 (71%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 42951 TATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAA 43010
||||| ||||||| || || | || || ||||| || ||||||||| ||||||||
Sbjct 434 TATTGACCTCCTCGTAGGCGAAGGACTAAGTGCAAGGTTGCCTCCTTTTGGATATTGTAG 375
Query 43011 TCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCG 43070
|| | || || ||| |||| || | ||||| ||||| || || | ||| ||||| ||
Sbjct 374 TCGGACAATGTGCGCCCGTCTTCCAATTGCTTTCCAGCAAAGATCAATCGTTGCTGATCT 315
Query 43071 GCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGAT 43130
| || | || |||||||| ||| ||||| || | | | | || ||||| | |
Sbjct 314 GGAGGAATGCCTTCCTTGTCTTGGATCTTTTGCTTCACGTTTTCGATGGTATCGCTTGGT 255
Query 43131 TCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| || || | ||||||||||| || || | |||||||| |||||||||||
Sbjct 254 TCTACGTCAAGGGTGATGGTTTTACCGGTCAAAGTCTTTACGAAGATTTGCAT 202
Score = 82.4 bits (90), Expect = 9e-11
Identities = 138/200 (69%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|| || | ||| || | || || ||||| || ||||||||| |||||||| || | |
Sbjct 200 CCACCACGTAAGCGAAGGACTAAGTGCAAGGTTGCCTCCTTTTGGATATTGTAGTCGGAC 141
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
| || ||| |||| || | ||||| ||||| || || | ||| ||||| || | ||
Sbjct 140 AATGTGCGCCCGTCTTCCAATTGCTTTCCAGCAAAGATCAATCGTTGCTGATCTGGAGGA 81
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136
| || |||||||| ||| ||||| || | | | | || ||||| | ||| ||
Sbjct 80 ATGCCTTCCTTGTCTTGGATCTTTTGCTTCACGTTTTCGATGGTATCGCTTGGTTCTACG 21
Query 43137 TCGACCGTGATGGTTTTGCC 43156
|| | ||||||||||| ||
Sbjct 20 TCAAGGGTGATGGTTTTACC 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571753120417880
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |