Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG41- 1_20[genbank_20GCA_5F900128575.1_202016-12-02] 9,021 sequences; 30,044,774 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq1170 104 3e-17 >seq1170 Length=16159 Score = 104 bits (114), Expect = 3e-17 Identities = 98/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 146063 CTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTA 146122 |||| || ||||||||||| |||||||| || || ||||| || ||||| | | | Sbjct 6731 CTTAGAACTAAATGTAAAGTTGATTCTTTTTGAATGTTGTAATCCGACAGAGTACGCCCA 6790 Query 146123 TCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTA 146182 || || || ||||| || || || ||||| ||||| ||||| ||||||||||||||||| Sbjct 6791 TCTTCCAACTGTTTGCCCGCGAATATCAACCTTTGTTGATCTGGAGGAATTCCTTCTTTG 6850 Query 146183 TCTTG 146187 ||||| Sbjct 6851 TCTTG 6855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743442558104320