Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG41- 1_20[genbank_20GCA_5F900128575.1_202016-12-02] 9,021 sequences; 30,044,774 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq7946 86.0 5e-12 >seq7946 Length=2495 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 |||||||| | | | || | |||||| || | ||||||||| |||||||| || | | Sbjct 428 CCTCCTCGTAGGCGAAGGACTAAGTGCAAGGTTGCCTCCTTTTGGATATTGTAGTCGGAC 369 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | ||| |||| |||| || || || ||| | || | || |||||||| || Sbjct 368 AATGTGCGCCCGTCTTCCAATTGCTTTCCAGCAAAGATCAATCGTTGCTGATCTGGAGGA 309 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | ||| || ||||| || || || || || | ||| ||||||| || || Sbjct 308 ATGCCTTCCTTGTCTTGGATCTTTTGCTTCACGTTTTCGATGGTATCGCTTGGTTCTACG 249 Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || | ||| ||||||||||| || ||||| || || || |||||||| Sbjct 248 TCAAGGGTGATGGTTTTACCGGTCAAAGTCTTTACGAAGATTTGCAT 202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414527220441274