Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG41- 1_20[genbank_20GCA_5F900128575.1_202016-12-02] 9,021 sequences; 30,044,774 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq7946 104 2e-17 >seq7946 Length=2495 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 43930 CTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAA 43989 ||| ||||| ||||| || ||| ||| ||| | || |||||||| ||||| ||||| Sbjct 393 CTCCTTTTGGATATTGTAGTCGGACAATGTGCGCCCGTCTTCCAATTGCTTTCCAGCAAA 334 Query 43990 TATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCAT 44049 ||||| |||||||| || |||| | ||||| || ||| || ||||| || || | Sbjct 333 GATCAATCGTTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGGATCTTTTGCTTCACGTT 274 Query 44050 AGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCAC 44109 | | ||||| || || || || | || || ||||||||||| |||||||| || Sbjct 273 TTCGATGGTATCGCTTGGTTCTACGTCAAGGGTGATGGTTTTACCGGTCAAAGTCTTTAC 214 Query 44110 AAATATTTGCAT 44121 || |||||||| Sbjct 213 GAAGATTTGCAT 202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354738594531108