Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG41- 1_20[genbank_20GCA_5F900128575.1_202016-12-02] 9,021 sequences; 30,044,774 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq1170 89.7 4e-13 >seq1170 Length=16159 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || || |||||||| | || ||||||| || ||||||||||| ||||||||||| | Sbjct 6719 CCGCCGCGTAACCTTAGAACTAAATGTAAAGTTGATTCTTTTTGAATGTTGTAATCCGAC 6778 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| ||||||||| ||||||||||| | || | ||| |||||||| || Sbjct 6779 AGAGTACGCCCATCTTCCAACTGTTTGCCCGCGAATATCAACCTTTGTTGATCTGGAGGA 6838 Query 20102 ACGCCTTCTTTGTC 20115 | ||||||||||| Sbjct 6839 ATTCCTTCTTTGTC 6852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419541069140901