Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stramenopiles_20sp._20TOSAG41-
1_20[genbank_20GCA_5F900128575.1_202016-12-02] 9,021 sequences; 30,044,774 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq7946 120 3e-22
>seq7946
Length=2495
Score = 120 bits (132), Expect = 3e-22
Identities = 167/234 (71%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 41975 TTATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTA 42034
|||| ||||||||| || || | || || ||||| || ||||||||| ||||||||
Sbjct 435 TTATTGACCTCCTCGTAGGCGAAGGACTAAGTGCAAGGTTGCCTCCTTTTGGATATTGTA 376
Query 42035 ATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTC 42094
|| | || || ||| |||| || | ||||| ||||| || || | ||| ||||| ||
Sbjct 375 GTCGGACAATGTGCGCCCGTCTTCCAATTGCTTTCCAGCAAAGATCAATCGTTGCTGATC 316
Query 42095 GGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGA 42154
| || | || |||||||| ||| ||||| || | | | | || ||||| |
Sbjct 315 TGGAGGAATGCCTTCCTTGTCTTGGATCTTTTGCTTCACGTTTTCGATGGTATCGCTTGG 256
Query 42155 TTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
||| || || | ||||||||||| || || | |||||||| |||||||||||
Sbjct 255 TTCTACGTCAAGGGTGATGGTTTTACCGGTCAAAGTCTTTACGAAGATTTGCAT 202
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/201 (69%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| || | ||| || | || || ||||| || ||||||||| |||||||| || |
Sbjct 201 ACCACCACGTAAGCGAAGGACTAAGTGCAAGGTTGCCTCCTTTTGGATATTGTAGTCGGA 142
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| || ||| |||| || | ||||| ||||| || || | ||| ||||| || | ||
Sbjct 141 CAATGTGCGCCCGTCTTCCAATTGCTTTCCAGCAAAGATCAATCGTTGCTGATCTGGAGG 82
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160
| || |||||||| ||| ||||| || | | | | || ||||| | ||| ||
Sbjct 81 AATGCCTTCCTTGTCTTGGATCTTTTGCTTCACGTTTTCGATGGTATCGCTTGGTTCTAC 22
Query 42161 ATCGACCGTGATGGTTTTGCC 42181
|| | ||||||||||| ||
Sbjct 21 GTCAAGGGTGATGGTTTTACC 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543151545966640
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |