Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG41- 1_20[genbank_20GCA_5F900128575.1_202016-12-02] 9,021 sequences; 30,044,774 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq6149 82.4 8e-11 >seq6149 Length=3715 Score = 82.4 bits (90), Expect = 8e-11 Identities = 175/257 (68%), Gaps = 12/257 (5%) Strand=Plus/Plus Query 153606 GCCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGG 153665 |||| ||||| || || | || || | || |||||| | ||| || | ||| | Sbjct 961 GCCAAGTTACAAACTGCGATTTCATCAGGTGCGGTGTACTCGATGATTTCAGTGCACAAA 1020 Query 153666 TTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTG 153725 ||||| | ||| ||| |||||| ||||| || ||| ||| || ||||||||||||||| Sbjct 1021 TTGCTACTTTTAATGGTGCCCAAGTTTTGTTGGTTGGATTTACGGTTGCACGCGTCTTTG 1080 Query 153726 AAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGA---TAAACCTATGCAGG 153782 | |||||||| || || || || ||||| |||||| | | |||| || Sbjct 1081 TAAAGCATGTATGGGGTTCCAGTTTCAACTTGACTTTCGATTATTTTGAACC---ACAAC 1137 Query 153783 TCCTGCGCTCGCACCCGCTGCCGATAGC---GGCCCTCGCTCTCGTATCGCTCGTACAGT 153839 || ||||| || | || | | || ||| ||||||||||||||| ||||||| Sbjct 1138 TCTTGCGCACGAA--CGGTCCTGA-AGCCCTTGCCCTCGCTCTCGTACTTTTCGTACAAA 1194 Query 153840 CGCTCAAACTCGTCGCC 153856 || ||||| ||||| Sbjct 1195 GTTTCGAACTCCTCGCC 1211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496206440211120