Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG41- 1_20[genbank_20GCA_5F900128575.1_202016-12-02] 9,021 sequences; 30,044,774 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq7946 104 2e-17 >seq7946 Length=2495 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| |||||||| || | || || |||||||||||| | ||||| || | | | Sbjct 202 ATGCAAATCTTCGTAAAGACTTTGACCGGTAAAACCATCACCCTTGACGTAGAACCAAGC 261 Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | ||||| | || |||| |||| ||||| || || ||||| | || || Sbjct 262 GATACCATCGAAAACG-TGAAGCAAAAGATCCAAGACAAGGAAGGCATTCCTCCAGATCA 320 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || || | || | || || || || |||| |||| |||||| | ||||||||| Sbjct 321 GCAACGATTGATCTTTGCTGGAAAGCAATTGGAAGACGGGCGCACATTGTCCGACTACAA 380 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||||| || || |||| || || || || Sbjct 381 TATCCAAAAGGAGGCAACCTTGCACTTAGTCCTTCG 416 Score = 82.4 bits (90), Expect = 8e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 38271 GGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGT-GCAAACGCTTAAAGAAAA 38329 || |||||||||||| | ||||| || | | ||| | | | | ||||| | || |||| Sbjct 1 GGTAAAACCATCACCCTTGACGTAGAACCAAGCGATACCATCGAAAACG-TGAAGCAAAA 59 Query 38330 AATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACA 38389 |||| ||||| || || ||||| | || || || || | || | || || || || Sbjct 60 GATCCAAGACAAGGAAGGCATTCCTCCAGATCAGCAACGATTGATCTTTGCTGGAAAGCA 119 Query 38390 GCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTT 38449 |||| |||| |||||| | ||||||||| ||||||||||| || || |||| || Sbjct 120 ATTGGAAGACGGGCGCACATTGTCCGACTACAATATCCAAAAGGAGGCAACCTTGCACTT 179 Query 38450 GGTGCTGCGTTT 38461 || || || || Sbjct 180 AGTCCTTCGCTT 191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500116399264640