Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG41- 1_20[genbank_20GCA_5F900128575.1_202016-12-02] 9,021 sequences; 30,044,774 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq6191 214 7e-50 seq5593 129 2e-24 seq777 111 6e-19 seq1868 104 9e-17 seq1170 100 1e-15 >seq6191 Length=3651 Score = 214 bits (236), Expect = 7e-50 Identities = 1020/1598 (64%), Gaps = 55/1598 (3%) Strand=Plus/Minus Query 450920 GGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTAGAA 450979 || ||||| | || || |||| || ||||| |||| | |||| | |||||| Sbjct 1911 GGTATTGACTTGGGTACAACCTACTCTTGTGTTGGTGCCTGGAAAAACAACCAGGTAGAA 1852 Query 450980 ATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACGGATTCA 451039 ||||| ||||| || ||||| | || || || || || | || || || || || Sbjct 1851 ATTATTGCAAACGATCAAGGTACTCGTACGACCCCATCGTACGTTGCCTTCACCGAATCT 1792 Query 451040 GAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTAAATTCAA--ATGCCAAA-AACA 451094 || | | | || | || || || ||||| || ||||| | |||| |||| Sbjct 1791 GAGCGTTTGATTGGTAACGCGGCGAAGAATCAA--GT---TTCAATGAACCCAATGAACA 1737 Query 451095 CAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAAAAG 451154 | |||| ||||| || ||||| ||||| || | | |||||| |||||| |||| Sbjct 1736 CTGTATTCGATGCCAAGCGTTTGATTGGACGCAATTTTGATGACCCAGATGTACAGAAAG 1677 Query 451155 AGAAAAAATTCTTTTCTTATGATGTAGTAAAT---CAAAAAGGAAAGCCCTATATTC-AA 451210 | | || || ||| |||| ||| | || ||||| || ||| || || Sbjct 1676 ATATGAAGCACTGGCCTTTCACTGTAAAAAAAGGGCCAAGTGGAAAACC-TATGATCGAA 1618 Query 451211 GTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTT 451270 || | || ||||| || | ||| |||| | | |||||||| ||||||| | Sbjct 1617 GTTCAGTACAAAGGCGAGAAGAAAGAATTTGGTGCCGAAGAAATCAGTGCTATGGTATTG 1558 Query 451271 ACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATT 451330 || ||||||||| |||||| ||| |||| | ||| || || || Sbjct 1557 ACCAAAATGAAAACCGTCGCAGAAGCATACCTTGGCACCGATGTTCAGTCCGCTGTTATC 1498 Query 451331 ACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATT 451390 || || || || || ||||| || | ||||| |||||||| |||||||| ||| || Sbjct 1497 ACCGTACCTGCATACTTCAACGACTCCCAACGTCAAGCAACCAAAGATGCTGGAACCATC 1438 Query 451391 GCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGA 451450 |||||| | || || | || |||||||| ||||| ||||||||||| | || || || Sbjct 1437 GCTGGTCTGAACGTCTTGCGTATTATTAACGAACCAACAGCAGCTGCGATCGCTTACGGT 1378 Query 451451 CTAGGAAAATCAAAAGAAA-CAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGG 451509 |||| | |||||| | ||||| || |||| | || || || |||||||| Sbjct 1377 CTAG-------ACAAGAAAGGTGGCGAAAAGAACGTTTTGATCTTCGACTTGGGTGGAGG 1325 Query 451510 AACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAA 451569 || ||| || | | | || |||||||| | ||||||||||| |||||| Sbjct 1324 TACATTCGATGTATCGTTGTTGACCATCGAAGATGGTATTTTTGAAGTAAAAGCAACCGC 1265 Query 451570 TGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGTGGAATGGTTGAAAAC 451629 || || || || || || || |||||| | || || || || || || ||| Sbjct 1264 AGGGGACACGCACCTGGGTGGCGAAGATTTCGACAACCGCATGGTCGATCACTTCAAACA 1205 Query 451630 TGATGTTCAACGAAAACTAAAAGTA--GATATTTCTACTAACCAAAAAGCACTTAGACGT 451687 || |||||| || || || || | || |||| | ||| | || || | ||| Sbjct 1204 AGA-GTTCAA-GAGAAAAAACAGGAAGGACCTTTCCAAGAACGAGCGTGCCCTACGTCGT 1147 Query 451688 CTTAAAACATCAGCAGAAAAAGCTAAAATTACACT---CAGTTCAACACAAAC-TACTAG 451743 ||| || ||| |||| ||| || | || | ||| || ||| | ||| Sbjct 1146 CTTCGCACGTCATGCGAAAGAGCAAAGAGGACCTTGTCTTCTTCTACCCAAGCATAC--- 1090 Query 451744 TATAAACATTGATAGTTTAGTTGATGGAATGGATTATGCTA-CTACTCTTACCCGTGCTA 451802 || | ||||| || | ||||| || |||| | | | | || | || |||||| Sbjct 1089 -ATCGAGATTGACTCGCTATTCGATGGCATTGATT-TCCAATCCACCATCACGCGTGCTC 1032 Query 451803 AATTTG----AATCAATTTGTTCCAGTATTTTTGCACGGGTAATGAAACCTGTTGATCAA 451858 || | ||| || || | || || ||| | | || | || || || | Sbjct 1031 GCTTCGAGGAAATGAACATG---GACTACTTCCGCAAGTG-CTTGGAGCCAGTCGAAAAG 976 Query 451859 GTATTACATGATTCTAAAATTAGTAAAGATAAAATTGATGAAATTGTGCTTGTAGGAGGT 451918 || ||| ||| | || || || ||| |||| ||| |||| | ||||| || Sbjct 975 GTTCTACGTGACGCGAAGATCTCCAAGGATCGCGTTGACGAAGTTGTTTTGGTAGGTGGC 916 Query 451919 TCTACACGAATTCCTAAAATTCAAGATATGTTG----TCTTCTTATTTTGGAGGAAAACA 451974 |||||| ||||| || | ||| |||||| ||||| | || ||| | Sbjct 915 AGTACACGTATTCCAAAGTTGCAAAGCATGTTGAAGCAATTCTTCAAT----GGCAAAGA 860 Query 451975 ACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGC 452034 | | || ||| | || || || |||||||||||||| |||||| | || ||||| || Sbjct 859 CCCAAACAAAAGCATCAACCCAGACGAAGCTGTTGCATACGGTGCTACCGTGCAAGCCGC 800 Query 452035 TATTCTAACAGGTTCAGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACC 452094 ||| || | ||| | || || || | || | |||| | |||||||| || Sbjct 799 TATCCTCAGTGGTGTTCAAGACTCCAACTTGGACGACTTGTTGTTGCTCGATGTAACCCC 740 Query 452095 TCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAAC 452154 | |||||| ||||||| || ||||| | |||||| |||| || || || Sbjct 739 ATTGAGTCTTGGTATTGAAACTGCAGGTGGTGTCATGACTGCGCTAATCAAGAGAAACAC 680 Query 452155 TTCTATTCCTTGTAAAAAGAGTCAAACATTTAGTACAGCAAGTGATAACCAACCAGGTGT 452214 || | || |||||||||||||| || |||||| ||||||||| |||||||| Sbjct 679 GACTGTACCAACCAAAAAGAGTCAAACTTTCAGTACATACGCTGATAACCAGCCAGGTGT 620 Query 452215 AACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGA 452274 | || ||||| || || || || ||||| ||||| || || | || | Sbjct 619 ATTGATCCAAGTATTCGAGGGTGAGCGTGCGATGACCAAGGACTGCAACTTGTTGGGCAA 560 Query 452275 ATTTACTCTTTCA-AACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCT 452333 |||| | ||| | ||||||||| |||||||| || || ||||| ||| |||||| Sbjct 559 ATTT-CACTTGGATGGCATTCCTCCAATGCCAAGAGGTGTACCACAAATCGAAGTTACCT 501 Query 452334 ATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAAAT 452393 | || | ||||| || ||||| || ||||| ||||| ||||| ||||| |||| Sbjct 500 ACGACATCGATGCTAACGGTATCCTAAATGTCAGTGCGGTTGAGAAATCCACTGGTCGCG 441 Query 452394 CAGAAAAAATTACAATTACTAATGATAAAAACCGTTTATCTAAAGAAGATATTGAAAAAA 452453 | | || ||||| |||||||||||||| ||| |||| | || || ||||| | Sbjct 440 AAAATAAGATTACCATTACTAATGATAAGGGACGTCTATCCAGTGAGGAAGTTGAACGTA 381 Query 452454 TGGTAGATGAAGCAGAAAAATTCAAGGATGATGATGAA 452491 |||| | ||||| || |||| ||| | ||| |||||| Sbjct 380 TGGTTGCCGAAGCCGAGAAATACAAAGCTGAAGATGAA 343 >seq5593 Length=4069 Score = 129 bits (142), Expect = 2e-24 Identities = 519/800 (65%), Gaps = 32/800 (4%) Strand=Plus/Minus Query 451262 ATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGAT 451321 || |||||| ||||||||| ||| |||||| || | | || ||| | | Sbjct 3267 ATCGTTCTTGGAAAAATGAAACAAATCGCAGAAACATTTTTAGGGCACGAAGTCAAGAAG 3208 Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381 || || || |||||||| || ||||||| |||| |||| ||| |||||| || || ||| Sbjct 3207 GCTGTCATCACTGTTCCTGCATATTTCAGTGATTCACAGCGGGCAGCAACAAAGGACGCA 3148 Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTA 451441 || |||||||| | | || | || || || || || || || || || || | Sbjct 3147 GGTGCCATTGCTGGCCTTGAAGTCATGCGTATCATCAACGAGCCAACTGCGGCGGCATTG 3088 Query 451442 GCATATGGACTAGGAAAATCAAAAGA-AACAGAAGaaaaa-aaTATTTTAGTATTTGATT 451499 || ||||| |||| | |||||| |||| | | || |||||||| ||||| |||| Sbjct 3087 GCTTATGGTCTAGATGA--CAAAAGTGAACAAACCACCAAGAATATTTTGGTATTCGATT 3030 Query 451500 TTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAA 451559 | || ||||| || ||| ||| | | ||||||| | || |||| || || | Sbjct 3029 TGGGCGGAGGTACCTTCGATGTTTCCATCTTGGCAATTGAGAAAGGCATATTCGAGGTGA 2970 Query 451560 AGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGTGGAAT 451619 |||| || ||| ||||| ||| | || |||||||| | || ||| ||| || || Sbjct 2969 AGGCTACTGCTGGAGATACACATTTGGGTGGTGAAGACTTCGACAAT---ATTTTGCAAA 2913 Query 451620 G----GTTGAAAACTGATGTTCAACG--AAAACT-AAAAGTAGAT---ATTTCTACTAAC 451669 || |||| || | ||||| ||||| ||||| | | || || |||| Sbjct 2912 ACCATGTACAAAAA-GAGTTCCAACGCAAAAACAGAAAAGCACCTTCGATAGCTGATAAC 2854 Query 451670 CAAAAAGCACTTAGACGTCTTAAAACATCAGCA---GAAAAAGCTAAAATTACACTCAGT 451726 ||| | | || || || ||| ||| |||||||| |||| | | | Sbjct 2853 GCGCGAGCTTTGAAGCGCCT-AAGACA--AGCTTGCGAAAAAGCCAAAAGGCAATTGTCT 2797 Query 451727 TCAA-CACAAACTACTAGTATAAACATTGATAGTTTAGTTGATGGAATGGATTATGCTAC 451785 | | ||||| | | | ||| | || || | || | ||||| || |||| | ||| Sbjct 2796 GCGAGCACAACCGCCACG-ATAGAAATAGACTCTCTAATCGATGGTATCGATTGTTCTAT 2738 Query 451786 TACTCTTACCCGTGCTAAATTTGAA--TCAATTTGTTCCAGTATTTTTGCACGGGTAATG 451843 || | || ||||| |||||||| || || || | | | | || || | | Sbjct 2737 CACAATCACACGTGCCAAATTTGACAGTCTATGTGAT---GAACTCTTCCAGAGATGCCT 2681 Query 451844 AAAC-CTGTTGATCAAGTATTACATGATTCTAAAATTAGTAAAGATAAAATTGATGAAAT 451902 | || |||| | | || || | ||| | | || | |||| | ||||| || || Sbjct 2680 AGACACTGTGAAATATGTTTTGAAGGATGCAGAGATGAAGCAAGAAGACATTGACGACAT 2621 Query 451903 TGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTCTTCTTATTT 451962 || ||||| || ||||| ||| |||| || ||||| ||| | || | || | ||| Sbjct 2620 CGTTCTTGTTGGTGGTTCCACAAGAATCCCAAAAATCCAAAGTGTGCTATCCGAATTTTT 2561 Query 451963 TGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTGCTGC 452022 ||| ||| | ||||| |||||| | || |||||||| ||||||||||| ||||| | Sbjct 2560 CAAAGGCAAAGATCTATGCAAGAGCATCAACCCTGATGAGGCTGTTGCATACGGTGCATC 2501 Query 452023 AGTTCAAGCAGCTATTCTAA 452042 ||||||| ||||||||||| Sbjct 2500 TGTTCAAGGAGCTATTCTAA 2481 >seq777 Length=1739 Score = 111 bits (122), Expect = 6e-19 Identities = 201/291 (69%), Gaps = 6/291 (2%) Strand=Plus/Plus Query 286385 TTTTTGTGATGGTCTTTGTAAACAATGTGTAATATCCATACTTACTAAATTTGTATCA-- 286442 ||||||||||||| ||||| |||||||| || ||||| | || || | ||| | Sbjct 1177 TTTTTGTGATGGTTGTTGTAGGCAATGTGTTATGTCCAT--TGACACAAGGT-TATGACG 1233 Query 286443 -GATTTTAACCATATTAAATTTCTTGGGTCAACTACCAAGTCTTGATAACCAAAACTATT 286501 ||||| | | | | |||| | || || | | ||| || ||||| | | Sbjct 1234 CGATTTCATCATTGGAATGTTTCGAGAATCTACAATTAGATCTCTGTATCCAAACATGGT 1293 Query 286502 ACCTCTTTCACATAAAATTATATTTTTATTACCAAAAGCAATAACTTTTTCCTTGCATTT 286561 ||||||||||| | ||| | ||| ||| |||||| | | |||||| ||||| Sbjct 1294 TCCTCTTTCACAAAGAATAACATTAGGATTTCCAAAATTTCTTATTTTTTCTGCACATTT 1353 Query 286562 ATGCATTACTTCTGCCGAACAAAATTGACCCTTTTTTATTTGAATAATTTTACCTGTTTC 286621 ||||||| ||| | | |||||||| |||||||| | ||||| | |||| || || Sbjct 1354 ATGCATTGTTTCAGGTGTGCAAAATTGCCCCTTTTTAACATGAATTAATTTATTAGTATC 1413 Query 286622 AGCTGCAGCTTTTAATAAATCAGTTTGACGACATAAAAAAGCAGGTATTTG 286672 || | ||||||||||||| |||||||||||||||||||| || | ||| Sbjct 1414 TGCAACCGCTTTTAATAAATTTGTTTGACGACATAAAAAAGCTGGAACTTG 1464 >seq1868 Length=10644 Score = 104 bits (114), Expect = 9e-17 Identities = 165/233 (71%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 96036 TTTTAAATTGATATGCAATTTGTGGCACTAGGGGATCGTCAGGATTTGGGTCAGCCAATA 96095 || ||||| || ||| |||| ||||| | |||||||| ||||| ||||| | ||| | Sbjct 7725 TTGTAAAT--ATTTGCGATTTCCGGCACCAACGGATCGTCTGGATTAGGGTCCGTCAACA 7782 Query 96096 AACTGCATAAGGATAAAAGTACTTTACTAATGTTTAATGCTGGGCTCCAGTTATTTTTTA 96155 || || | || ||||||||||| ||| |||| || |||||||| | | |||| Sbjct 7783 AAGAACAAACCGACAAAAGTACTTTTGATATGGTTAAAGCCGGGCTCCATTGTTCCTTTA 7842 Query 96156 AAATATCTAAACAAAT-TGCACCTGTAGTACTAATATTTGGATGATAAATAGGAGTTTTA 96214 ||||||| || ||||| ||| || | | | | || || || |||||||| | || | Sbjct 7843 AAATATCCAAGCAAATCTGC-CCATTGGCATTGATGTTAGGGTGATAAATTCGTGTCGTG 7901 Query 96215 AATATAATTTTAGGAGGCTTATATGGATAGTCTTCAGGAAAAGTAATTTCTAA 96267 || ||||||| || || ||| | ||||| ||| | || ||| ||| | ||| Sbjct 7902 AAATTAATTTTTGGTGGTTTAAACGGATAATCTGCTGGGAAATGAATGTTTAA 7954 >seq1170 Length=16159 Score = 100 bits (110), Expect = 1e-15 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 391072 TGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTGAAGCTATTAAAC 391131 ||||||| ||||| || |||| ||||||||| || | | ||| | | |||| Sbjct 6923 TGACTGGAAAAACCATACCTCTATATGTTGAATTTTCGTACAGTATTAGTGACGTCAAAC 6864 Query 391132 AAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGA 391191 ||||||||| || |||||||||||||| ||||||||| | || || ||| | || | Sbjct 6863 GTGCAATTCAAGACAAAGAAGGAATTCCTCCAGATCAACAAAGGTTGATATTCGCGGGCA 6804 Query 391192 AACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGATGCAACACTTC 391251 |||| | |||||||| | ||| || ||||||| || ||| | || || |||| | | Sbjct 6803 AACAGTTGGAAGATGGGCGTACTCTGTCGGATTACAACATTCAAAAAGAATCAACTTTAC 6744 Query 391252 ACTTAGTATTAAG 391264 | ||||| |||| Sbjct 6743 ATTTAGTTCTAAG 6731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975490043380268