Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG41- 1_20[genbank_20GCA_5F900128575.1_202016-12-02] 9,021 sequences; 30,044,774 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq6191 545 3e-150 seq6149 140 4e-28 seq6863 116 5e-21 >seq6191 Length=3651 Score = 545 bits (604), Expect = 3e-150 Identities = 1088/1592 (68%), Gaps = 40/1592 (3%) Strand=Plus/Plus Query 6568 TTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGA 6627 |||||||||| |||| || || || || || ||||| ||||| || || | || Sbjct 343 TTCATCTTCAGCTTTGTATTTCTCGGCTTCGGCAACCATACGTTCAACTTCCTCACTGGA 402 Query 6628 TAATCTCCCCTTATCATTCGTAATCGTAATCTT---TTCGGATTTACCCGAGGCCTTATC 6684 || | ||||||||||| ||||| |||||||| |||| ||| | || || || Sbjct 403 TAGACGTCCCTTATCATTAGTAATGGTAATCTTATTTTCGCG---ACCAGTGGATTTCTC 459 Query 6685 TTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGG 6744 | ||||| ||||| | ||||| || ||||| | ||| | | || | |||||||| Sbjct 460 AACCGCACTGACATTTAGGATACCGTTAGCATCGATGTCGTAGGTAACTTCGATTTGTGG 519 Query 6745 TGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATC 6804 | ||| || || | ||||| || || | |||| | || | || || || Sbjct 520 TACACCTCTTGGCATTGGAGGAATGCCATCCAAGTGAAATTTGCCCAACAAGTTGCAGTC 579 Query 6805 CGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCT-- 6862 | | | | || ||| ||||| || | |||| || || | || || ||||| Sbjct 580 CTTGGTCATCGCACGCTCACCCTCGAATACTTGGATCAATACACCTGGCTGGTTATCAGC 639 Query 6863 ---TGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATA 6919 ||| | ||| ||| || ||||| || | ||| | ||||| |||||| || Sbjct 640 GTATGTAC---TGA-AAGTTTGACTCTTT-TTGGTTGGTACAGTCGTGTTTCTCTTGATT 694 Query 6920 ACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAG 6979 | || ||||| | |||||| |||||| | |||||| || || || || || | Sbjct 695 AGCGCAGTCATGACACCACCTGCAGTTTCAATACCAAGACTCAATGGGGTTACATCGAGC 754 Query 6980 AGTAACAGGTCTTGAACAGATTCGTTCCCTT--CACCCGTTAAGATGGCGGCTTGGACCG 7037 | |||| ||| | | || || | | | |||| | | ||| |||||||| || | Sbjct 755 AACAACAAGTCGTCCA-AG-TTGGAGTCTTGAACACCACTGAGGATAGCGGCTTGCACGG 812 Query 7038 TCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAA 7097 | || |||||||| || || || || ||||| || |||| || | ||||| || || | Sbjct 813 TAGCACCGTATGCAACAGCTTCGTCTGGGTTGATGCTTTTGTTTGGGTCTTTGCCATTGA 872 Query 7098 AATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGA 7157 | | | | ||||| ||| | || || || ||||| ||||| |||||||| | Sbjct 873 AGAATTGCTTCAACATGCTTTGCAACTTTGGAATACGTGTACTGCCACCTACCAAAACAA 932 Query 7158 TTTCATTCACTTTCGAT--TTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTC 7215 ||| | || |||| || |||||| | ||| || || |||||||| || || Sbjct 933 CTTCGTCAACG--CGATCCTTGGAGATCTTCGCGTCACGTAGAACCTTTTCGACTGGCTC 990 Query 7216 CATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGT 7275 || || || ||||| ||||||| || |||||| || || ||||| || |||| | Sbjct 991 CAAGCACTTGCGGAAGTAGTCCATGTTCATTTCCTCGAAGCGAGCACGCGTGATGGTGGA 1050 Query 7276 ATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGA 7335 | |||||||| ||| ||| ||| ||| ||||| || ||| || ||| | | ||||| Sbjct 1051 TTGGAAATCAATGCCATCGAATAGCGAGTCAATCTCGATGTATGCTTGGGTAGAAGAAGA 1110 Query 7336 TAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACC 7395 || || | |||||| | || || | ||| || | |||||| ||||||||| ||| Sbjct 1111 CAAGGTCCTCTTTGCTCTTTCGCATGACGTGCGAAGACGACGTAGGGCACGCTCGTTCTT 1170 Query 7396 GGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGA--AGGAGTCT 7452 ||||| || ||| | | ||| | || ||||||| |||||| |||| | | | | Sbjct 1171 GGAAAGGTCCTTCCTGTTTTTTCTCTTGAACTCTTGTTTGAAGTGATCGACCATGCGGTT 1230 Query 7453 CGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGAT 7512 ||||||||||| ||||||| ||| || ||||| ||||| ||||| |||||||| || Sbjct 1231 G---TCGAAATCTTCGCCACCCAGGTGCGTGTCCCCTGCGGTTGCTTTTACTTCAAAAAT 1287 Query 7513 ACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAG 7572 ||| |||| ||| | |||||||| ||||| || ||||| ||||||| ||| || || | Sbjct 1288 ACCATCTTCGATGGTCAACAACGATACATCGAATGTACCTCCACCCAAGTCGAAGATCAA 1347 Query 7573 TACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 |||||| | ||| | |||| ||| || |||||||| ||||| || || || ||||| Sbjct 1348 AACGTTCTTTTCGCCACCTTT---CTTGTCTAGACCGTAAGCGATCGCAGCTGCTGTTGG 1404 Query 7633 TTCATTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTT 7691 ||| ||||||||||| ||||| |||||| ||||| || ||| | |||||||| || |||| Sbjct 1405 TTCGTTAATAATACGCAAGAC-GTTCAGACCAGCGATGGTTCCAGCATCTTTGGTTGCTT 1463 Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTAC 7751 | ||||| || ||||| ||||| || || || || | || ||| | || | | | Sbjct 1464 GACGTTGGGAGTCGTTGAAGTATGCAGGTACGGTGATAACAGCGGACTGAACATCGGTGC 1523 Query 7752 CGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 | || || | ||| |||| |||||||||||| | ||||| | || ||||| | Sbjct 1524 CAAGGTATGCTTCTGCGACGGTTTTCATTTTGGTCAATACCATAGCACTGATTTCTTCGG 1583 Query 7812 CCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGC-AGCA 7870 | |||| | |||| | || || || | | |||||| ||||| ||||| ||| | | Sbjct 1584 CACCAAATTCTTTCTTCTCGCCTTTGTACTGAACTTCGATCATAGGTTT-TCCACTTGGC 1642 Query 7871 CCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAAC 7930 || | || | | | ||| | |||||||| | || || | | |||| ||| Sbjct 1643 CCTTTTTTTACAGTGAAAGGCCAGTGCTTCATATCTTTCTGTACATCTGGGTCATCAAAA 1702 Query 7931 TTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGG 7990 || | ||| || | |||||| ||||| || || ||||| | |||||||| | ||| Sbjct 1703 TTGCGTCCAATCAAACGCTTGGCATCGAATACAGTGTTCATTGGGTTCATTGAAACTTGA 1762 Query 7991 TTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGG 8050 ||||||||||||| || || | ||| || | ||| || || || |||||||||||| Sbjct 1763 TTCTTCGCCGCGTTACCAATCAAACGCTC---AGATTCGGTGAAGGCAACGTACGATGGG 1819 Query 8051 GTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCG 8110 ||||| ||| | ||||| ||||| |||||||||||||| ||| ||||| |||| | || Sbjct 1820 GTCGTACGAGTACCTTGATCGTTTGCAATAATTTCTACCTGGTTGTTTTTCCAGGCACCA 1879 Query 8111 ACGCACGAATACGTTGTTCCTAAATCAATACC 8142 || || || || ||||| || || |||||||| Sbjct 1880 ACACAAGAGTAGGTTGTACCCAAGTCAATACC 1911 >seq6149 Length=3715 Score = 140 bits (154), Expect = 4e-28 Identities = 293/432 (68%), Gaps = 16/432 (4%) Strand=Plus/Plus Query 104362 CGAAGGTAATACATACCCGTTTTTAAACCAGTTTTCCACGCGTACATGTGCATAGACGAA 104421 || ||||| |||||||| || || ||||| ||||||| || || | ||||||||| | Sbjct 70 CGCAGGTAGTACATACCAGTCTTCAAACCCTTTTTCCATGCATAGAAGTGCATAGAGGTT 129 Query 104422 AGTTTTGAAATTGTTGGACTCTCGACGAATAAGTTCATACTTTGACTTTGGTCTATATAC 104481 |||||| | |||| | | | || || | ||||||||| ||||| ||||| Sbjct 130 AGTTTTCCTGTGCTTGGGGCAGCTATGTGTACATTTAAACTTTGACTCTGGTCAATATAT 189 Query 104482 ACACCTCTATCCGCCGCCATATCGATGATTGTTTTTTGACTCATTTCCCATACGGTTTTA 104541 |||| | ||| || ||||||| | ||| ||||||||||| ||||||||||| || || Sbjct 190 GCACCACGATCGGCAGCCATATTTAAGATGGTTTTTTGACTGATTTCCCATACCGTCTTG 249 Query 104542 TACAATTCCTTAAGATCATCGGGTATATCAATAATGTTTTGAACAGACCCATTTGCCTTC 104601 ||||| || || || | || | | || || |||||| || || ||| || || Sbjct 250 TACAAATCTTTGTATTCTTTTGGCAAACCAGCAACGTTTTGCACTGATCCA----CCATC 305 Query 104602 A-CCATAAGATCTTTCATTTCCTTCGACCAGAGTCC--ACGTT---CTT--TCAAATCGT 104653 | | |||| ||| || | | | | |||| | ||| ||| |||| || | Sbjct 306 AGCAATAA----TTTGGTTGCGGACACTCGGTGTCCATATGTTCAGCTTAATCAAGTCTT 361 Query 104654 TTACTAAATGTTTGTTTACGACGACAAATTCACCCGCGAGTGTTCGTCTCAAATAGATAT 104713 | | ||||||||||| || | |||||||| || || || | || || | Sbjct 362 TCAACAAATGTTTGTTCACACAGGTGAATTCACCAGCAAGGACCCGGCGATTGTACATGT 421 Query 104714 TGGTCGTATACGGTTCGAAACACTCGTTGTTCCCTAAAATCTGGGATGTGGATGCGGTAG 104773 ||| || || || ||||| |||||||| || || | ||| || || || |||||||| | Sbjct 422 TGGAGGTGTAAGGCTCGAAGCACTCGTTATTGCCCATAATTTGCGAGGTTGATGCGGTTG 481 Query 104774 GCATAGGTGCAA 104785 |||| ||||||| Sbjct 482 GCATTGGTGCAA 493 Score = 107 bits (118), Expect = 2e-18 Identities = 477/749 (64%), Gaps = 11/749 (1%) Strand=Plus/Plus Query 105253 TTACATACGGCGGTTTCTTCCTTATCCGTAAACTCCAGAATTTCTGTACACAAATTTGAT 105312 ||||| || ||| |||| || | || |||| | ||||| || |||||||| Sbjct 967 TTACAAACTGCGATTTCATCAGGTGCGGTGTACTCGATGATTTCAGTGCACAAATTGCTA 1026 Query 105313 GATTTAATCGTACCAACGTGTTTATGGTTCGACTTTTCATTACACGCGTCTTTGTAAAGC 105372 |||||| || || | || || ||||| || || || |||||||||||||||||| Sbjct 1027 CTTTTAATGGTGCCCAAGTTTTGTTGGTTGGATTTACGGTTGCACGCGTCTTTGTAAAGC 1086 Query 105373 ATATATGGGGTTCCCGTTTCACTTTGGGATTTAATAATTGCTTTCCAAATCTCCGAAGCT 105432 || ||||||||||| |||||| ||| || || ||| ||| | ||| || Sbjct 1087 ATGTATGGGGTTCCAGTTTCAACTTGACTTTCGATTATTTTGAACCACAACTCTTGCGCA 1146 Query 105433 GGTACAA--CTTTAGTTGCGATACCTTCAGATTCGTATTTCTCGTAAAGATCTTCAAACT 105490 | || || || | | || || ||||| || ||||| | | ||| |||| Sbjct 1147 CGAACGGTCCTGAAGC--CCTTGCCCTCGCTCTCGTACTTTTCGTACAAAGTTTCGAACT 1204 Query 105491 CTTTACCGTACACGTC-TGAAAGACCCTTTGCCTGATCAGGACAAAACAATGACCAATTA 105549 | | || || || || || ||| || | || ||||| | | ||| | Sbjct 1205 CCTCGCCCCACGTATCGTGCAA-ACCACGCGCTACGTTCGGGCAAAATAGGGTCCATTGC 1263 Query 105550 CCATCGGATTCAACGCGTTTCATGAACAAATCTGGAATCCACATGGCTGAAAAGAGGTCT 105609 ||| | || || || ||||||||||| || || ||||||||||| | || | ||| Sbjct 1264 TTATCTGCTTGTACACGCTTCATGAACAAGTCGGGTATCCACATGGCGTAGAACAAGTCA 1323 Query 105610 CGACACCTCGCCTCTTCATCACCTTGATTCAAACGAATTTCGAGAAAATCGAGAATATCG 105669 || | || | ||| || || || || | || | || |||| | || Sbjct 1324 CGCGCGCGGGCATTTTCGTCCCCATGGTTTTTCTTCAAATCCAAGAATTCGAAGACGTCC 1383 Query 105670 GCGTGCCATGGTTCTAAATAGACTGCAATAGACCCTTTACGA----CGCCCCGCTTGATT 105725 | ||||||||||| || || | || | ||||||||| || |||||| |||| | Sbjct 1384 GAATGCCATGGTTCCAAGTAAATGGCGAAAGACCCTTTGCGTTTGCCGCCCC-CTTGGTC 1442 Query 105726 GACATATCTTGCGGTTGAGTTATACACTCGTAACATTGGAATAATACCATCGGATGTTCC 105785 || || | |||||| || | |||| || ||| || | || || | | || ||| Sbjct 1443 TACGTAGCGTGCGGTGTCATTGAAGACTCTTAGCATAGGTACGATGCCGTTGCTTGATCC 1502 Query 105786 ATTTGTTCCACGAATATGTGATTTATTTGCACGTACATCGTGAACGTGTAACCCAATACC 105845 || || |||||||| | | | ||| | | ||| || | || || || Sbjct 1503 GTTCGTGCCACGAATGTAGCTACCAGTACTACGGATGTTGTGGACACTAAGGCCGATGCC 1562 Query 105846 CCCAGCCCACTTACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCGTCGATACT 105905 ||||| |||| || || | || ||| || | || ||||||||||||||||| Sbjct 1563 ACCAGCATACTTGCTTATGCAAGCGCACGACTTCAAGGTGTCGTAAATACCGTCGATCGA 1622 Query 105906 ATCTTCCTTATTCGCAATCAGGAAACACGATGACATTTGTGGTCTGGGTGTACCAGCATT 105965 || ||||| | | || ||||| ||||| | || |||||| | || ||||| || || Sbjct 1623 GTCATCCTTCATGGTAACAAGGAAGCACGAGGCCAATTGTGGGCGCGGGGTACCGGCGTT 1682 Query 105966 GAACAGAGTTGGTGTTGCATGAATGAACA 105994 ||||| |||||||| || ||| |||||| Sbjct 1683 GAACAACGTTGGTGTAGCGTGAGTGAACA 1711 >seq6863 Length=3142 Score = 116 bits (128), Expect = 5e-21 Identities = 168/237 (71%), Gaps = 9/237 (4%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||| |||||||| | || ||||| || || || |||| || || ||||| || Sbjct 2739 ATCGAAATCCTCACCACCGAGATGGGTATCTCCGGCAGTAGCTTGCACCTCGAAGATTCC 2680 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | |||||| | | | || ||||| |||||||||||||| || || || || || || Sbjct 2679 GTCCTCAATGGTAAGAAGAGACACATCGAACGTACCACCACCGAGATCGAAGATAAGAAC 2620 Query 7576 GTTCGTAT------CGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGT 7629 |||| | | ||||||| |||||||| ||||||||| || || || || ||||| Sbjct 2619 GTTCATCTCACCGCCGTCGTCCTTGTTCTT---GAGACCGTAAGCAATCGCAGCTGCCGT 2563 Query 7630 TGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGT 7686 || || || || || | | ||||| || || || | |||| |||||||| Sbjct 2562 GGGCTCGTTGATGATTCTCGGCACGTTCAACCCTGCGATCTTCCCCGCGTCTTTCGT 2506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635061180837640