Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG41- 1_20[genbank_20GCA_5F900128575.1_202016-12-02] 9,021 sequences; 30,044,774 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq6149 89.7 1e-12 >seq6149 Length=3715 Score = 89.7 bits (98), Expect = 1e-12 Identities = 221/335 (66%), Gaps = 9/335 (3%) Strand=Plus/Plus Query 212921 GAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTC 212980 ||| ||||| | || |||| | | ||| | ||| || ||||| ||||||| || ||| Sbjct 387 GAATTCACCAGCAAGGACCCGGCGATTGTACATGTTGGAGGTGTAAGGCTCGAAGCACTC 446 Query 212981 GTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTT 213040 ||| || |||| ||| || | || || || ||||| || || |||| | | ||| Sbjct 447 GTTATTGCCCATAATTTGCGAGGTTGATGCGGTTGGCATTGGTGCAACCAACAAAGAGTT 506 Query 213041 CCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAG 213100 | |||||||| | |||| | || || || ||||| ||||||| | |||| || Sbjct 507 GCGTACTCCGTGTTGTTTGATGTTGGCACGTAGTTCAGCCCAATCCCATCGGTCAGA-AG 565 Query 213101 GTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCC 213160 || | ||| |||||| || |||||||||||||| || || || ||||| Sbjct 566 GTG--------TAACGCCCCACATATCTGGTTGCAAGATGCCTTTACTGACTGGACTGCC 617 Query 213161 CTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGC 213220 || ||| | ||| || || | || || |||||||| || || || || Sbjct 618 CTCGTACGTCTTGTACGGTCCGAACCTTTTCGCTTCTTCGCAGGAAGCGGTCAAAGCGGC 677 Query 213221 GTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCT 213255 | |||| ||||| || || || || |||| |||| Sbjct 678 GAAGTAAATGGTCTCGAAAATATCTTTGTTTAGCT 712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931427758032640