Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG41- 1_20[genbank_20GCA_5F900128575.1_202016-12-02] 9,021 sequences; 30,044,774 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq1170 89.7 4e-13 >seq1170 Length=16159 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 28647 GACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAA 28706 |||||||| ||| | || ||||||||| || | || || ||||||||||| |||||| Sbjct 6852 GACAAAGAAGGAATTCCTCCAGATCAACAAAGGTTGATATTCGCGGGCAAACAGTTGGAA 6793 Query 28707 GATTCTAAAACTATGGCCGATTATAACATTCAAAAAGAATCTACTCTGCACATGGTATTA 28766 ||| ||| || | ||||| ||||||||||||||||| ||| | || | || || Sbjct 6792 GATGGGCGTACTCTGTCGGATTACAACATTCAAAAAGAATCAACTTTACATTTAGTTCTA 6733 Query 28767 AGATTACGAGGAGG 28780 || ||||| || || Sbjct 6732 AGGTTACGCGGCGG 6719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425358029533959