Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG41- 1_20[genbank_20GCA_5F900128575.1_202016-12-02] 9,021 sequences; 30,044,774 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq8913 138 1e-27 >seq8913 Length=774 Score = 138 bits (152), Expect = 1e-27 Identities = 438/667 (66%), Gaps = 38/667 (6%) Strand=Plus/Minus Query 138180 GCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTA 138239 || || ||||||| || || || || || ||||| ||||||||||| ||||| || || Sbjct 729 GCAACCCCAATAGATCCGACACCCGGCCCCCCACCGCCATGTGGAATGCAGAAGGTTTTG 670 Query 138240 TGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGT 138299 |||||||||||||| || |||||||| || | | ||| | || || || || Sbjct 669 TGTAAATTTAGATGGCAGACATCTGCGCCGATTTTTCCTGGGCTGCAGAGCCCAACTTGG 610 Query 138300 GCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACAT 138359 || || | |||||||| || | ||| || || ||||| || ||| || || | Sbjct 609 GCGTTCATGTTTGCACCGTCCATATAGACTTGCCCACCGTTACTATGGACAATATCGATA 550 Query 138360 ATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACAT 138419 || | | ||| | |||||||||||||| || ||||| ||||||| ||| | || Sbjct 549 ATTTCTACAATGCCTTCTTCAAATACACCATACGTAGATGGGTATGTAACCATCA-AC-- 493 Query 138420 GAGAGTTCAAATGTATTCATGATTGCTTT-----CTTCTC---TAGATCTTTGATGTCTA 138471 | |||| || ||| | |||||| |||| | ||| || | || || | Sbjct 492 --GCACTCAA--GTTTTC-TTTGTGCTTTTCTGCCTTCGCACTTAGGTCATCGACATCAA 438 Query 138472 TGTTGCCATCATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAG 138531 |||| ||| ||| || | ||| ||| || ||||||||||| |||||||| || || | Sbjct 437 TGTTACCAAGATCGTCGCTCTTTACAGTGACCACTTTCATTCCAGCCATGACGGCGCTTG 378 Query 138532 CAGGATTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATCATCTCC-T 138590 | || | |||||||| ||||| ||| || | ||| | ||||| | | || | Sbjct 377 CTGGGGTTGTTCCATGCGCTGATAATGGAATTAAACAAATATTTCGGTGGGATTGACCTT 318 Query 138591 GATCCTTGATGATATGCTT--GGATTGCTAACAGTCCTGCATACTCACCCTGTGATCCTG 138648 || || | ||||| ||| | || |||| || |||||||| || | |||| Sbjct 317 GAGCC-TCTTGATA--CTTACGAATACAAAACAAACCAGCATACTCGCCAGACGCACCTG 261 Query 138649 CGTTAGGTTGTAATGATATAGAATCAAAACCTGTGATATCACATAAC-CAT--TTCTGTA 138705 ||||| ||| ||||| | | |||| || || || | | ||| ||| || Sbjct 260 AATTAGGCTGTGTTGATACTGCAGCAAACTGCGTTATTTCTGCCAGCGCATAATTCAGTG 201 Query 138706 AGTCATCTATTATCTTTTGATAACC-----CATGGTCTGTATCATAGGTGTATGTGGATG 138760 | ||| || || | || ||||| | |||| || |||| | |||||| Sbjct 200 A---ATCAATCATTTCTTTGTAACCAGTAACTTGGTGTG-----CCGGTGCAAATGGATG 149 Query 138761 CACGTTGGCAAATTCTTCCCATGACACAGGCATCAGTTCTGCTGCTGCATTTAGTTTCAT 138820 ||||| ||||| ||| |||||| |||||| || |||| |||| ||||| |||||| Sbjct 148 GACGTTTGCAAACTCTGGCCATGAAACAGGCTCCATTTCTAACGCTGAATTTAATTTCAT 89 Query 138821 TGTGCAA 138827 || ||| Sbjct 88 AGTACAA 82 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578933110692920