Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG41- 1_20[genbank_20GCA_5F900128575.1_202016-12-02] 9,021 sequences; 30,044,774 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq6191 417 1e-111 seq5593 163 4e-35 seq6863 154 2e-32 seq7946 123 3e-23 seq1170 105 9e-18 seq1820 93.3 6e-14 >seq6191 Length=3651 Score = 417 bits (462), Expect = 1e-111 Identities = 1062/1596 (67%), Gaps = 41/1596 (3%) Strand=Plus/Minus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 ||| | ||||| || || || || || ||||| |||||||||| ||| |||| | | Sbjct 1917 GCTGTAGGTATTGACTTGGGTACAACCTACTCTTGTGTTGGTGCCTGGAAAAACAACCAG 1858 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 ||||| ||||| | || || ||||| | ||||| || ||||||||||||||||| || Sbjct 1857 GTAGAAATTATTGCAAACGATCAAGGTACTCGTACGACCCCATCGTACGTTGCCTTCACC 1798 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 || ||| ||| | |||| | || || || ||||| | |||||||| || || Sbjct 1797 GAATCTGAGCGTTTGATTGGTAACGCGGCGAAGAATCAAGTTTCAATGAACCCAATGAAC 1738 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 ||||| || || || |||||| | ||||| ||||| ||| || | || || | Sbjct 1737 ACTGTATTCGATGCCAAGCGTTTGATTGGACGCAATTTTGATGACCCAGATGTACAGAAA 1678 Query 195539 GATATAAAGGACTGGTCTTA---TG---AAGTTGTTCCCGGTGTGGCTGATAAGCCTATG 195592 ||||| ||| ||||| ||| || || | || ||| || || |||||| Sbjct 1677 GATATGAAGCACTGGCCTTTCACTGTAAAAAAAGGGCCAAGTG-----GAAAA-CCTATG 1624 Query 195593 ATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATG 195652 || | ||| | | | || ||||||||| |||||| | |||||||||| ||||| Sbjct 1623 ATCGAAGTTCAGTACAAAGGCGAGAAGAAAGAATTTGGTGCCGAAGAAATCAGTGCTATG 1564 Query 195653 GTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCA 195712 || |||| || ||||| || ||| | | | | || | ||| | || Sbjct 1563 GTATTGACCAAAATGAAAACCGTCGCAGAAGCATACCTTGGCACCGATGTTCAGTCCGCT 1504 Query 195713 GTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCT 195772 ||| | || |||||||| ||||||| || || ||||| || || || || || |||| Sbjct 1503 GTTATCACCGTACCTGCATACTTCAACGACTCCCAACGTCAAGCAACCAAAGATGCTGGA 1444 Query 195773 GCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAATTGC 195831 | || || ||||| ||| ||||| | ||||| || ||||||||||| ||||| || || Sbjct 1443 ACCATCGCTGGTCTGAAC-GTCTTGCGTATTATTAACGAACCAACAGCAGCTGCGATCGC 1385 Query 195832 TTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGG 195891 ||| ||||| |||||||| | |||| || || || |||||||| || | ||||| Sbjct 1384 TTACGGTCTAGACAAGAAAGGTGGCGAA---AAGAACGTTTTGATCTTCGACTTGGGTGG 1328 Query 195892 TGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTAC 195951 ||||| || ||||| || | | | || |||| |||||| || |||||||| || || Sbjct 1327 AGGTACATTCGATGTATCGTTGTTGACCATCGAAGATGGTATTTTTGAAGTAAAAGCAAC 1268 Query 195952 TGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTC 196011 || || || || || || ||||| ||||||||||| || | || ||| || Sbjct 1267 CGCAGGGGACACGCACCTGGGTGGCGAAGATTTCGACAACCGCATGGTCGATCACTTCAA 1208 Query 196012 TGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCG 196071 | |||||| |||| || | ||| || |||| || | || || ||||| Sbjct 1207 ACAAGAGTTCAAGAGAAAAAACAGGAAGGACCTTTCCAAGAACGAGCGTGCCCTACGTCG 1148 Query 196072 GCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGT 196131 ||| | || |||| ||| | || || | || | |||||| | | ||| || | Sbjct 1147 TCTTCGCACGTCATGCGAAAGAGCAAAGAGGACCTTGTCTTCTTCTACCCAAGCATACAT 1088 Query 196132 TGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTT 196191 |||||||| ||| | || || || ||||| ||| | | || || || ||||| || || Sbjct 1087 CGAGATTGACTCGCTATTCGATGGCATTGATTTCCAATCCACCATCACGCGTGCTCGCTT 1028 Query 196192 TGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCG 196251 || || | ||| || | || | ||||| |||| || || ||| | || || || Sbjct 1027 CGAGGAAATGAACATGGACTACTTCCGCAAGTGCTTGGAGCCAGTCGAAAAGGTTCTACG 968 Query 196252 TGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCG 196311 |||||| ||||| ||| | ||||| ||| |||| | || || || || || Sbjct 967 TGACGCGAAGATCTCCAAGGATCGCGTTGACGAAGTTGTTTTGGTAGGTGGCAGTACACG 908 Query 196312 TATTCCGAAGATTCAACAGATGCTTTCTAGC--TTCTTCAATAATAAAGATTTAAACAAA 196369 |||||| ||| | ||| ||| || ||| ||||||||| ||||| ||||||| Sbjct 907 TATTCCAAAGTTGCAAAGCATG--TTGAAGCAATTCTTCAATGGCAAAGACCCAAACAAA 850 Query 196370 ACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCA 196429 | |||||||| || ||||| ||||| || ||||| |||| || || ||||| ||| Sbjct 849 AGCATCAACCCAGACGAAGCTGTTGCATACGGTGCTACCGTGCAAGCCGCTATCCTCAGT 790 Query 196430 GGTGTTGACAATAAT--AACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCC 196487 |||||| ||| | | ||| | | || | || | || ||||| | || | | Sbjct 789 GGTGTT--CAAGACTCCAACTTGGACGACTTGTTGTTGCTCGATGTAACCCCATTGAGTC 732 Query 196488 TGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTC 196547 | ||| ||||||| || |||||||| |||||| | || | || ||||| ||| | | Sbjct 731 TTGGTATTGAAACTGCAGGTGGTGTCATGACTGCGCTAATCAAGAGAAACACGACTGTAC 672 Query 196548 CGACTAAGAAGGAACAAGTCTTTTCA--ACGTATTCCGATAATCAACCAGGTGTTCATAT 196605 | || || ||| ||| ||||| || || | ||||| || |||||||| || Sbjct 671 CAACCAAAAAGAGTCAAAC--TTTCAGTACATACGCTGATAACCAGCCAGGTGTATTGAT 614 Query 196606 TCAAGTATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGG--AACTTT 196662 ||||||| || || || || | | || | ||||| | | || |||| || ||| Sbjct 613 CCAAGTATTCGAGGGTGAGCG-TGCGATGACCAAGGACTGCAA-CTTGTTGGGCAAATTT 556 Query 196663 CGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGA 196722 | || || || ||||| | || |||||||| ||||| || | ||| || ||| Sbjct 555 CACTTGGATGGC-ATTCCTCCAATGCCAAGAGGTGTACCACAAATCGAAGTTACCTACGA 497 Query 196723 TATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGG---CAAATC 196779 || || || || || || ||||| |||| || | || || | |||| | || Sbjct 496 CATCGATGCTAACGGTATCCTAAATGTCAGTGCGGTTGAGAAATCCACTGGTCGCGAAAA 437 Query 196780 TGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTAT 196839 | |||||| ||||| ||||| ||||| || || || | |||||| |||||||||| Sbjct 436 T---AAGATTACCATTACTAATGATAAGGGACGTCTATCCAGTGAGGAAGTTGAACGTAT 380 Query 196840 GGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGA 196875 |||| || || || || |||| | ||||| || Sbjct 379 GGTTGCCGAAGCCGAGAAATACAAAGCTGAAGATGA 344 >seq5593 Length=4069 Score = 163 bits (180), Expect = 4e-35 Identities = 477/713 (67%), Gaps = 45/713 (6%) Strand=Plus/Minus Query 195302 ATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTA 195361 ||||| ||||| || || || || ||||| ||||| ||||| ||| || | ||| ||||| Sbjct 3621 ATTGGAATCGACTTGGGTACCACATACTCCTGTGTCGGTGTTTGGAAAGACGATGGTGTA 3562 Query 195362 GAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATC-GTACGTTGCCTTTA---C 195417 | || ||| |||| || |||| | |||||||||| |||| ||| |||| ||||| | Sbjct 3561 AAAATCATCGCGAACGAGGAAGGTAGCCGTACAACTGCATCTGTA-GTTGGCTTTAGCGC 3503 Query 195418 AGATAAT---GAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTAT 195474 ||||| | ||||| ||||||||| | || ||| || | |||||||||| | Sbjct 3502 AGATAGTAGCGAACGCTTCGTTGGAGCACCAGCCCAAAGGCAAGCTTCTATGAACCCAAA 3443 Query 195475 CAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCG--GATAAGAAAGTC 195532 || || || | |||| || ||| | || ||| | | || || || |||| || Sbjct 3442 AAACACCGTTTACGACGTAAAACGTTTGATCGGTAGT--GGTTACGAGGAAGAGAAGGTA 3385 Query 195533 CAAGACGATATAAAGGACTGGTCT--TATGAAGTTGT----TCCCGGTGTGGCTGATAAG 195586 | | || || | | || | ||||| || | |||| | || || ||| Sbjct 3384 CGCAAGGACATTGA--AATGTTTCAATATGACGTACTAAAATCCCCA-GAGG--GA-AAG 3331 Query 195587 CCTATGATTAATGTTGAATTTCACGGTGAGAAGAAAC--AATTTGCTCCCGAAGAAATTT 195644 || ||| | || ||||||| | || || |||||| | | ||| || ||| || | Sbjct 3330 CCAATGGTAAAGGTTGAATACAATGG--AGCAGAAACGCAGTATGCGCCAGAACAAGTAA 3273 Query 195645 CGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGA 195704 | || || | || ||||| | | || ||| | || | || | || | Sbjct 3272 GTGCCATCGTTCTTGGAAAAATGAAACAAATCGCAGAAACATTTTTAGGGCACGAAGTCA 3213 Query 195705 AAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGG 195764 | | || || | ||||| ||||| || |||||||||||||| || || ||||||| Sbjct 3212 AGAAGGCTGTCATCACTGTTCCTGCATATTTCAGTGATTCACAGCGGGCAGCAACAAAGG 3153 Query 195765 ACGCTGCTGCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCT 195823 |||| | ||| ||||| || || | ||| | | || ||||| || ||||| ||||| Sbjct 3152 ACGCAGGTGCCATTGCTGGCCTTGAA-GTCATGCGTATCATCAACGAGCCAACTGCGGCG 3094 Query 195824 GCAATTGCTTATGGTCTGGA---CAA----GAACAAGGACGAAGATAAAAATGTATTGAT 195876 ||| | ||||||||||| || ||| |||||| || | | | ||| | ||| | Sbjct 3093 GCATTGGCTTATGGTCTAGATGACAAAAGTGAACAA--ACCACCA--AGAATATTTTGGT 3038 Query 195877 CTTTGATCTCGGTGGTGGTACGTTTGATGTCTCA--CTTCTCAATATTGAAGGTGGTATA 195934 || ||| | || || ||||| || ||||| || ||| |||| ||| | | ||| Sbjct 3037 ATTCGATTTGGGCGGAGGTACCTTCGATGTTTCCATCTTGGCAATTGAGAAAG--GCATA 2980 Query 195935 TTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 ||||| || |||||||||||||| ||||| ||| | ||||||||||| ||||| Sbjct 2979 TTCGAGGTGAAGGCTACTGCTGGAGATACACATTTGGGTGGTGAAGACTTCGA 2927 >seq6863 Length=3142 Score = 154 bits (170), Expect = 2e-32 Identities = 155/201 (77%), Gaps = 9/201 (4%) Strand=Plus/Plus Query 195797 AGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGAC 195856 ||||| ||||| || || || || ||||| |||||||| ||||| ||||||||||||| Sbjct 2545 AGAATCATCAACGAGCCCACGGCAGCTGCGATTGCTTACGGTCT---CAAGAACAAGGAC 2601 Query 195857 GAAG------ATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCA 195910 || | | | || || | ||||| |||||||||||||||||||| ||||| || Sbjct 2602 GACGGCGGTGAGATGAACGTTCTTATCTTCGATCTCGGTGGTGGTACGTTCGATGTGTCT 2661 Query 195911 CTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTA 195970 ||||| | ||||| | || || ||||| || | |||||||| || ||||| ||||| Sbjct 2662 CTTCTTACCATTGAGGACGGAATCTTCGAGGTGCAAGCTACTGCCGGAGATACCCATCTC 2721 Query 195971 GGTGGTGAAGATTTCGATGCA 195991 |||||||| |||||||||||| Sbjct 2722 GGTGGTGAGGATTTCGATGCA 2742 >seq7946 Length=2495 Score = 123 bits (136), Expect = 3e-23 Identities = 167/233 (72%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||||||||| || || || | || || ||||| |||||||| || || || Sbjct 197 GTGGTATGCAAATCTTCGTAAAGACTTTGACCGGTAAAACCATCACCCTTGACGTAGAAC 256 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || || ||||| ||| | || ||||| ||||| |||||||||||||| || | Sbjct 257 CAAGCGATACCATCGAAAACGTGAAGCAAAAGATCCAAGACAAGGAAGGCATTCCTCCAG 316 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 ||||||||||| | || |||||||| || || | ||||| || || || | | || | Sbjct 317 ATCAGCAACGATTGATCTTTGCTGGAAAGCAATTGGAAGACGGGCGCACATTGTCCGACT 376 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 |||| | ||||||||| | || | ||| | || || | || || || ||| Sbjct 377 ACAATATCCAAAAGGAGGCAACCTTGCACTTAGTCCTTCGCCTACGAGGAGGT 429 Score = 102 bits (112), Expect = 1e-16 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 171889 GGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCCAAG 171948 || ||||| |||||||| || || || | || || ||||| ||| | || ||| Sbjct 1 GGTAAAACCATCACCCTTGACGTAGAACCAAGCGATACCATCGAAAACGTGAAGCAAAAG 60 Query 171949 ATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAG 172008 || ||||| |||||||||||||| || |||||||||||| | || |||||||| || || Sbjct 61 ATCCAAGACAAGGAAGGCATTCCTCCAGATCAGCAACGATTGATCTTTGCTGGAAAGCAA 120 Query 172009 CTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTT 172068 | ||||| || || || | | || ||||| | ||||||||| | || | ||| | Sbjct 121 TTGGAAGACGGGCGCACATTGTCCGACTACAATATCCAAAAGGAGGCAACCTTGCACTTA 180 Query 172069 GTTCTAAGGCTTCGGGGTGGT 172089 || || | | || |||||| Sbjct 181 GTCCTTCGCTTACGTGGTGGT 201 >seq1170 Length=16159 Score = 105 bits (116), Expect = 9e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 171873 TGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGA 171932 ||| || || | ||||||||||| || | || | ||||| | || ||| || Sbjct 6934 TGTCAAGACTTTGACTGGAAAAACCATACCTCTATATGTTGAATTTTCGTACAGTATTAG 6875 Query 171933 TAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTAT 171992 | || ||||| |||||||| || ||||| ||||| || ||||| ||| | | || Sbjct 6874 TGACGTCAAACGTGCAATTCAAGACAAAGAAGGAATTCCTCCAGATCAACAAAGGTTGAT 6815 Query 171993 TTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGA 172052 || || || |||||| | |||||||| ||||| || | ||||||||| ||||||| || Sbjct 6814 ATTCGCGGGCAAACAGTTGGAAGATGGGCGTACTCTGTCGGATTACAACATTCAAAAAGA 6755 Query 172053 GTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 || ||| |||| | ||||||||| | || || || Sbjct 6754 ATCAACTTTACATTTAGTTCTAAGGTTACGCGGCGG 6719 >seq1820 Length=11475 Score = 93.3 bits (102), Expect = 6e-14 Identities = 105/138 (76%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 160503 TAAGGAATAGATGAATGATGAAGGCAAATACGTACCTTACCATCCGGGTTACGTTTATAC 160562 || |||| |||||||||||||||| |||| ||| |||| || ||| ||||||||| || Sbjct 7605 TACGGAACAGATGAATGATGAAGGAAAATTCGTGCCTTCCCGTCCTCGTTACGTTTGTAG 7664 Query 160563 CCAAATGTATATTCAACATCCGAAATTGAC-CCAGTTGTTGCACACGTAAATTCGTACGT 160621 ||||| ||||||||||| | | | || | || |||||||| ||||| | |||| Sbjct 7665 CCAAACGTATATTCAACCTTC-ACATCATCATTTGTAGTTGCACATGTAAACACATACGA 7723 Query 160622 ACCCATTGCAATCGCTAC 160639 |||||| || || || || Sbjct 7724 ACCCATGGCGATTGCAAC 7741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657788217791120