Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG41- 1_20[genbank_20GCA_5F900128575.1_202016-12-02] 9,021 sequences; 30,044,774 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq1170 95.1 2e-14 >seq1170 Length=16159 Score = 95.1 bits (104), Expect = 2e-14 Identities = 153/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 155830 TATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATA 155889 ||| | | || || |||||||||||||| || | || | || ||| ||| | | || Sbjct 6938 TATATGTCAAGACTTTGACTGGAAAAACCATACCTCTATATGTTGAATTTTCGTACAGTA 6879 Query 155890 TTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGAT 155949 || |||| ||| | ||| ||||| |||||||| || |||||||| |||||||| | Sbjct 6878 TTAGTGACGTCAAACGTGCAATTCAAGACAAAGAAGGAATTCCTCCAGATCAACAAAGGT 6819 Query 155950 TGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCA 156009 |||| | || || || ||| | |||||| | ||| | || ||||| || || | Sbjct 6818 TGATATTCGCGGGCAAACAGTTGGAAGATGGGCGTACTCTGTCGGATTACAACATTCAAA 6759 Query 156010 AAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 |||| | || | |||||||| |||| ||| | ||||| Sbjct 6758 AAGAATCAACTTTACATTTAGTTCTAAGGTTACGCGGCGG 6719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731789472283600