Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG41- 1_20[genbank_20GCA_5F900128575.1_202016-12-02] 9,021 sequences; 30,044,774 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq6149 109 7e-18 >seq6149 Length=3715 Score = 109 bits (120), Expect = 7e-18 Identities = 191/276 (69%), Gaps = 4/276 (1%) Strand=Plus/Plus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 ||||| |||||||| || ||||| || ||||| | ||||| || |||| ||||||| | Sbjct 1438 TGGTCTACGTAGCGTGCGGTGTCATTGAAGACTCTTAGCATAGGTACGATGCCGTTG--C 1495 Query 1630126 TCG--CCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGC 1630183 | | ||||| ||||| | |||| || | || | ||||| | || || Sbjct 1496 TTGATCCGTTCGTGCCACGAATGTAGCTACCAGTACTACGGATGTTGTGGACACTAAGGC 1555 Query 1630184 CGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCT 1630243 ||||||| || || ||||| ||| |||||| || | |||||||| || || | Sbjct 1556 CGATGCCACCAGCATACTTGCTTATGCAAGCGCACGACTTCAAGGTGTCGTAAATACCGT 1615 Query 1630244 CGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGC 1630303 |||||||||| |||||||| || || |||||||| | ||| ||| ||| || | Sbjct 1616 CGATCGAGTCATCCTTCATGGTAACAAGGAAGCACGAGGCCAATTGTGGGCGCGGGGTAC 1675 Query 1630304 CGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACA 1630339 |||||||||| | ||| || || || ||||||| Sbjct 1676 CGGCGTTGAACAACGTTGGTGTAGCGTGAGTGAACA 1711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106398894494657