Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG41- 1_20[genbank_20GCA_5F900128575.1_202016-12-02] 9,021 sequences; 30,044,774 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq6149 89.7 8e-12 >seq6149 Length=3715 Score = 89.7 bits (98), Expect = 8e-12 Identities = 180/265 (68%), Gaps = 4/265 (2%) Strand=Plus/Plus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 ||||| || ||||| || ||||| || ||||| | ||||| || || | ||||||| | Sbjct 1438 TGGTCTACGTAGCGTGCGGTGTCATTGAAGACTCTTAGCATAGGTACGATGCCGTTG--C 1495 Query 2073601 TCG--CCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGC 2073658 | | ||||| ||||| | |||| || | || | ||||| | || || Sbjct 1496 TTGATCCGTTCGTGCCACGAATGTAGCTACCAGTACTACGGATGTTGTGGACACTAAGGC 1555 Query 2073659 CGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCT 2073718 ||||||| || || |||| ||| |||||| |||| || ||||| || || | Sbjct 1556 CGATGCCACCAGCATACTTGCTTATGCAAGCGCACGACTTCAAGGTGTCGTAAATACCGT 1615 Query 2073719 CGATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGC 2073778 |||||||||| |||||||| | || |||||||| | ||| ||||||| || | Sbjct 1616 CGATCGAGTCATCCTTCATGGTAACAAGGAAGCACGAGGCCAATTGTGGGCGCGGGGTAC 1675 Query 2073779 CGGCATTGAAGAGCGTGGGCGTCGC 2073803 |||| ||||| | ||| || || || Sbjct 1676 CGGCGTTGAACAACGTTGGTGTAGC 1700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915286795085219