Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG41- 1_20[genbank_20GCA_5F900128575.1_202016-12-02] 9,021 sequences; 30,044,774 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq7946 111 2e-19 >seq7946 Length=2495 Score = 111 bits (122), Expect = 2e-19 Identities = 166/236 (70%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| |||| || || || || ||||| || || |||| ||||||| | || Sbjct 203 TGCAAATCTTCGTAAAGACTTTGACCGGTAAAACCATCACCCTTGACGTAGAACCAAGCG 262 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || |||| || || | || || ||| || ||||||||||| || ||||| | Sbjct 263 ATACCATCGAAAACGTGAAGCAAAAGATCCAAGACAAGGAAGGCATTCCTCCAGATCAGC 322 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || || | || ||||| || || ||||| || || | || || | || || |||| Sbjct 323 AACGATTGATCTTTGCTGGAAAGCAATTGGAAGACGGGCGCACATTGTCCGACTACAATA 382 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATA 146267 | ||||| || | || | || ||||| | || || |||||||| ||||| || Sbjct 383 TCCAAAAGGAGGCAACCTTGCACTTAGTCCTTCGCCTACGAGGAGGTCAATAAGTA 438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786077749911320