Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG41- 1_20[genbank_20GCA_5F900128575.1_202016-12-02] 9,021 sequences; 30,044,774 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq2807 104 3e-17 >seq2807 Length=647 Score = 104 bits (114), Expect = 3e-17 Identities = 111/144 (77%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 193453 TAGGGGATAAATTTTGTTC-AGGAATGGCCCAAAAAGGAACTTGTGGTATGATTTATTCA 193511 |||| |||||||||| ||| |||||||| | ||||||| |||| || | | | || Sbjct 363 TAGGTGATAAATTTTCTTCCAGGAATGGGC-AAAAAGGTGTTTGTAGTGTATTATGGCCA 421 Query 193512 CAAGAAGATATGCCATTTACAGCTTCAGGTATGGTACCAGATATTATTATTAATCCAAAT 193571 ||| ||||||||||||||| | || |||||| ||||||||||||||| || ||| || Sbjct 422 CAACGAGATATGCCATTTACGGAATCTGGTATGACACCAGATATTATTATCAACCCACAT 481 Query 193572 TGTATTCCATCCAGAATGACCATT 193595 ||||||| |||||||| ||| Sbjct 482 GCATTTCCATCTAGAATGACAATT 505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635105975785880