Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG41- 1_20[genbank_20GCA_5F900128575.1_202016-12-02] 9,021 sequences; 30,044,774 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq7946 141 9e-29 seq1170 89.7 5e-13 >seq7946 Length=2495 Score = 141 bits (156), Expect = 9e-29 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 137182 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 137241 || |||||||||| || | ||||| || | || | || ||||| || ||||| ||| Sbjct 431 TGACCTCCTCGTAGGCGAAGGACTAAGTGCAAGGTTGCCTCCTTTTGGATATTGTAGTCG 372 Query 137242 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 137301 || ||||| | |||||| | ||| || |||||| |||||| ||||||||||| ||| Sbjct 371 GACAATGTGCGCCCGTCTTCCAATTGCTTTCCAGCAAAGATCAATCGTTGCTGATCTGGA 312 Query 137302 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCT 137361 || |||||||| ||||| || ||||| || | | ||| | || || | |||||| Sbjct 311 GGAATGCCTTCCTTGTCTTGGATCTTTTGCTTCACGTTTTCGATGGTATCGCTTGGTTCT 252 Query 137362 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 || |||| || | || || |||||||| || |||||||| ||||||||| Sbjct 251 ACGTCAAGGGTGATGGTTTTACCGGTCAAAGTCTTTACGAAGATTTGCATA 201 Score = 102 bits (112), Expect = 8e-17 Identities = 133/184 (72%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || ||||| || | ||||| || | || | || ||||| || ||||| ||| | Sbjct 200 CCACCACGTAAGCGAAGGACTAAGTGCAAGGTTGCCTCCTTTTGGATATTGTAGTCGGAC 141 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | ||||| | |||||| | ||| || |||||| |||||| ||||||||||| ||||| Sbjct 140 AATGTGCGCCCGTCTTCCAATTGCTTTCCAGCAAAGATCAATCGTTGCTGATCTGGAGGA 81 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 |||||||| ||||| || ||||| || | | ||| | || || | |||||||| Sbjct 80 ATGCCTTCCTTGTCTTGGATCTTTTGCTTCACGTTTTCGATGGTATCGCTTGGTTCTACG 21 Query 137365 TCAA 137368 |||| Sbjct 20 TCAA 17 >seq1170 Length=16159 Score = 89.7 bits (98), Expect = 5e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 137170 CCACCGCGGACATGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGT 137229 ||||| || || |||| || ||||| | | ||||||||| | || ||||||||||| Sbjct 6704 CCACCAGGGCCAGGGCCGCCGCGTAACCTTAGAACTAAATGTAAAGTTGATTCTTTTTGA 6763 Query 137230 ATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGT 137289 ||||||||||| || || | | ||||| | ||||| || || | |||| | | Sbjct 6764 ATGTTGTAATCCGACAGAGTACGCCCATCTTCCAACTGTTTGCCCGCGAATATCAACCTT 6823 Query 137290 TGCTGATCGGGAGGTATGCCTTCTTTGTC 137318 || ||||| ||||| || ||||||||||| Sbjct 6824 TGTTGATCTGGAGGAATTCCTTCTTTGTC 6852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488488910557200