Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stramenopiles_20sp._20TOSAG41-
1_20[genbank_20GCA_5F900128575.1_202016-12-02] 9,021 sequences; 30,044,774 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq7946 98.7 9e-16
>seq7946
Length=2495
Score = 98.7 bits (108), Expect = 9e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974
|| || || | | ||| ||| ||||| || ||||||||| || || ||| |||||
Sbjct 410 ACTAAGTGCAAGGTTGCCTCCTTTTGGATATTGTAGTCGGACAATGTGCGCCCGTCTTCC 351
Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034
| || || || | | |||| | || || ||||||||||| |||||||| || ||
Sbjct 350 AATTGCTTTCCAGCAAAGATCAATCGTTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGG 291
Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094
|| ||||| |||| | ||| | |||||| | || || || || | || | ||||||
Sbjct 290 ATCTTTTGCTTCACGTTTTCGATGGTATCGCTTGGTTCTACGTCAAGGGTGATGGTTTTA 231
Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| |||| ||| |||| ||| || |||||
Sbjct 230 CCGGTCAAAGTCTTTACGAAGATTTGCAT 202
Score = 82.4 bits (90), Expect = 7e-11
Identities = 135/195 (69%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
||| ||||| | || || || | | ||| ||| ||||| || ||||||||| || ||
Sbjct 195 ACGTAAGCGAAGGACTAAGTGCAAGGTTGCCTCCTTTTGGATATTGTAGTCGGACAATGT 136
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
||| ||||| | || || || | | |||| | || || ||||||||||| |||||
Sbjct 135 GCGCCCGTCTTCCAATTGCTTTCCAGCAAAGATCAATCGTTGCTGATCTGGAGGAATGCC 76
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
||| || || || ||||| |||| | ||| | |||||| | || || || || |
Sbjct 75 TTCCTTGTCTTGGATCTTTTGCTTCACGTTTTCGATGGTATCGCTTGGTTCTACGTCAAG 16
Query 132082 CGTCAGCGTTTTACC 132096
|| | ||||||||
Sbjct 15 GGTGATGGTTTTACC 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476557456129560
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |