Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG41- 1_20[genbank_20GCA_5F900128575.1_202016-12-02] 9,021 sequences; 30,044,774 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq7946 87.8 1e-12 >seq7946 Length=2495 Score = 87.8 bits (96), Expect = 1e-12 Identities = 137/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574 ||||||||| || || || || || | ||| ||| ||||||| | ||| || || ||||| Sbjct 393 CTCCTTTTGGATATTGTAGTCGGACAATGTGCGCCCGTCTTCCAATTGCTTTCCAGCAAA 334 Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634 || || || || || || || || | || ||||||||| ||||||||| || | Sbjct 333 GATCAATCGTTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGGATCTTTTGCTTCACGTT 274 Query 34635 TAAAATTGTGTC--TTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTC 34692 | || || || || | ||| || || | ||| || ||||||||||| || || || Sbjct 273 TTCGATGGTATCGCTTGGTTCT--ACGTCAAGGGTGATGGTTTTACCGGTCAAAGTCTTT 216 Query 34693 ACAAAAATCTGCAT 34706 || || || ||||| Sbjct 215 ACGAAGATTTGCAT 202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314694997545893